DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tudor-SN and tdrd15

DIOPT Version :9

Sequence 1:NP_001261195.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001182210.1 Gene:tdrd15 / 799498 ZFINID:ZDB-GENE-041014-303 Length:1883 Species:Danio rerio


Alignment Length:582 Identity:109/582 - (18%)
Similarity:203/582 - (34%) Gaps:172/582 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 LYEIPHMFDAREFLRKKLINKKVQCNLD----------YISPP----RENFP---------EKYC 449
            :.|:|.       :...:|.|::..::|          .|..|    .|:.|         ::||
Zfish   172 ILEVPE-------INSDMIKKRLGRHVDTSTFLLLVEMLIDEPIPQSNESVPDLLIEKQIGQEYC 229

  Fly   450 Y----------TVSIGG---------QNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQ- 494
            .          .:|:.|         :.|..|.|..||..|.......|.:..:....:|.|.. 
Zfish   230 LKSSSLLGFEEILSLNGPKLKVGQEVEVVVAAAVNPGLFYCRLSSMGKDLQEMSDKLALACESGS 294

  Fly   495 ---------------AIKGLKGLHAKKDNATLR--VNDLTVDHSRIKVQYLPS-WQRALRTEAIV 541
                           |:||       ||....|  |..|.: :|::||.::.| :..:::.|.|:
Zfish   295 GCLTNDLDENLGLLCAVKG-------KDEKWHRGFVECLPL-NSQVKVVFVDSGYCESVKVENIL 351

  Fly   542 EFVASGSRLRIFVPKDSCLVTFLLAGISCPRSSRPALNGVPAQEGEPFGDEALTFTRERVLQRDV 606
            :           :|.:     ||    |.|..:.|.......::.|...::.:...:..:|.:.:
Zfish   352 Q-----------LPSE-----FL----SRPIMAFPCSLSCLEKQDEDIKNQQVDALKTGLLGKVL 396

  Fly   607 SVHIDTTDKAGSSVIGWLWTDSGANLSVALVEEGLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNI 671
            .:.||               |...:.::.||...:|:.|     ||....:|..|.....:..|.
Zfish   397 EIEID---------------DFRKDQNLYLVTMNIAQKH-----SEKQAGVKPHESDNLRSNSNF 441

  Fly   672 WTNYVEEVPKEKT---VTEEEKEDKVVAERKVNYENVIVTEITETLTFFAQSVESGSKLESLMSK 733
            ..:.:..|...:|   .|.:...::.:.:... :|..:| .:.....|:.::.|.....|: |:|
Zfish   442 PYDVLSNVSAGETKVAQTSDSNPNRAIPDDSF-FEGYVV-HVQSPKHFWIRTKEHNPNFEN-MTK 503

  Fly   734 LHADF----QSNPPIAGSYTPKRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPT 794
            ..||:    |.:..:.....|  |.|..|.:..|.|:|||.|.......|.|.:||:||.|.:|.
Zfish   504 EMADYFSKLQLHEEVFEDLVP--GALCCAMYENDMQYYRALVVDTLDKGAEVFFIDFGNTEKVPG 566

  Fly   795 NRLAALPPAFSSEKPYATEYALALVALPTDNEDKEEALRAFSEDVLNHKVQLNVELKVTGSPNLA 859
            ..:..||..|:....:|.|.|||.|| |             .||:..                  
Zfish   567 ILIKKLPKKFAIHPEFAMECALAHVA-P-------------HEDIWT------------------ 599

  Fly   860 TLRDPTTKVDFGKQLVAEGLVLAEQRGERKLKELVDQYKAAQEAARVAHLAI-------WKY 914
                 ||..::.:::.::..::......:..|.:||.::...|...:|.:..       |:|
Zfish   600 -----TTASNYFREVTSDKTLMIHVVHRKNRKYVVDLFERDAENCSIATIMTTAKMALDWRY 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_001261195.1 SNc 23..166 CDD:214615
SNc 195..333 CDD:214615
SNc 346..504 CDD:320778 25/153 (16%)
SNc 538..672 CDD:214615 22/133 (17%)
TUDOR 697..817 CDD:306940 34/123 (28%)
SNc 767..914 CDD:320778 33/153 (22%)
tdrd15NP_001182210.1 TUDOR 69..113 CDD:119391
TUDOR 264..370 CDD:278965 26/133 (20%)
TUDOR 306..352 CDD:119391 14/53 (26%)
TUDOR 468..590 CDD:278965 35/126 (28%)
TUDOR 525..571 CDD:119391 17/45 (38%)
TUDOR 738..852 CDD:278965
TUDOR 945..1065 CDD:278965
TUDOR 999..1043 CDD:119391
TUDOR 1227..1339 CDD:278965
TUDOR 1274..1319 CDD:119391
TUDOR 1618..1729 CDD:278965
TUDOR 1661..1710 CDD:119391
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.