DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tudor-SN and tdrd15

DIOPT Version :10

Sequence 1:NP_612021.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001182210.1 Gene:tdrd15 / 799498 ZFINID:ZDB-GENE-041014-303 Length:1883 Species:Danio rerio


Alignment Length:582 Identity:109/582 - (18%)
Similarity:203/582 - (34%) Gaps:172/582 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 LYEIPHMFDAREFLRKKLINKKVQCNLD----------YISPP----RENFP---------EKYC 449
            :.|:|.       :...:|.|::..::|          .|..|    .|:.|         ::||
Zfish   172 ILEVPE-------INSDMIKKRLGRHVDTSTFLLLVEMLIDEPIPQSNESVPDLLIEKQIGQEYC 229

  Fly   450 Y----------TVSIGG---------QNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQ- 494
            .          .:|:.|         :.|..|.|..||..|.......|.:..:....:|.|.. 
Zfish   230 LKSSSLLGFEEILSLNGPKLKVGQEVEVVVAAAVNPGLFYCRLSSMGKDLQEMSDKLALACESGS 294

  Fly   495 ---------------AIKGLKGLHAKKDNATLR--VNDLTVDHSRIKVQYLPS-WQRALRTEAIV 541
                           |:||       ||....|  |..|.: :|::||.::.| :..:::.|.|:
Zfish   295 GCLTNDLDENLGLLCAVKG-------KDEKWHRGFVECLPL-NSQVKVVFVDSGYCESVKVENIL 351

  Fly   542 EFVASGSRLRIFVPKDSCLVTFLLAGISCPRSSRPALNGVPAQEGEPFGDEALTFTRERVLQRDV 606
            :           :|.:     ||    |.|..:.|.......::.|...::.:...:..:|.:.:
Zfish   352 Q-----------LPSE-----FL----SRPIMAFPCSLSCLEKQDEDIKNQQVDALKTGLLGKVL 396

  Fly   607 SVHIDTTDKAGSSVIGWLWTDSGANLSVALVEEGLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNI 671
            .:.||               |...:.::.||...:|:.|     ||....:|..|.....:..|.
Zfish   397 EIEID---------------DFRKDQNLYLVTMNIAQKH-----SEKQAGVKPHESDNLRSNSNF 441

  Fly   672 WTNYVEEVPKEKT---VTEEEKEDKVVAERKVNYENVIVTEITETLTFFAQSVESGSKLESLMSK 733
            ..:.:..|...:|   .|.:...::.:.:... :|..:| .:.....|:.::.|.....|: |:|
Zfish   442 PYDVLSNVSAGETKVAQTSDSNPNRAIPDDSF-FEGYVV-HVQSPKHFWIRTKEHNPNFEN-MTK 503

  Fly   734 LHADF----QSNPPIAGSYTPKRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPT 794
            ..||:    |.:..:.....|  |.|..|.:..|.|:|||.|.......|.|.:||:||.|.:|.
Zfish   504 EMADYFSKLQLHEEVFEDLVP--GALCCAMYENDMQYYRALVVDTLDKGAEVFFIDFGNTEKVPG 566

  Fly   795 NRLAALPPAFSSEKPYATEYALALVALPTDNEDKEEALRAFSEDVLNHKVQLNVELKVTGSPNLA 859
            ..:..||..|:....:|.|.|||.|| |             .||:..                  
Zfish   567 ILIKKLPKKFAIHPEFAMECALAHVA-P-------------HEDIWT------------------ 599

  Fly   860 TLRDPTTKVDFGKQLVAEGLVLAEQRGERKLKELVDQYKAAQEAARVAHLAI-------WKY 914
                 ||..::.:::.::..::......:..|.:||.::...|...:|.:..       |:|
Zfish   600 -----TTASNYFREVTSDKTLMIHVVHRKNRKYVVDLFERDAENCSIATIMTTAKMALDWRY 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_612021.1 SNc 23..166 CDD:214615
SNc 195..333 CDD:214615
SNc 346..504 CDD:469627 25/153 (16%)
SNc 538..672 CDD:214615 22/133 (17%)
Tudor_TDRD11 723..805 CDD:410504 26/85 (31%)
YncB <868..926 CDD:441134 7/54 (13%)
tdrd15NP_001182210.1 Tudor_TDRD15_rpt1 20..166 CDD:410507
Tudor_TDRD15_rpt2 251..371 CDD:410508 29/147 (20%)
Tudor_SF 471..608 CDD:470623 43/178 (24%)
Tudor_SF 733..855 CDD:470623
Tudor_TDRD15_rpt5 940..1065 CDD:410511
Tudor_TDRD15_rpt6 1233..1341 CDD:410512
Tudor_SF 1613..1745 CDD:470623
Blue background indicates that the domain is not in the aligned region.

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