DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tudor-SN and TDRD1

DIOPT Version :9

Sequence 1:NP_001261195.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001372292.1 Gene:TDRD1 / 56165 HGNCID:11712 Length:1189 Species:Homo sapiens


Alignment Length:786 Identity:171/786 - (21%)
Similarity:267/786 - (33%) Gaps:253/786 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 LSVKVPFADEARYYVETRLLQRDVEIRLESVNNSNFIGTILYPKGNIAESLLREGLAKCVDWSMA 307
            :|||.||...:|..:|....:.......|...|.      |.|.    |||...|         .
Human     1 MSVKSPFNVMSRNNLEAPPCKMTEPFNFEKNENK------LPPH----ESLRSPG---------T 46

  Fly   308 VMKTGTDKLRAAERFAKEKRL---RQWQDYQAKTPAFNSKEKDFSGTVVEVFNGDAINVRLSNGQ 369
            :......:|:::|...|:...   .|.:.|.|      |:|.:...:.....||:.:.   |.|.
Human    47 LPNHPNFRLKSSENGNKKNNFLLCEQTKQYLA------SQEDNSVSSNPNGINGEVVG---SKGD 102

  Fly   370 VKKV-FFSSIRPPRDQRAVVGTDGEEIVKAPPR------GKNYRPLYEIPHMFDAREFLRKKLIN 427
            .||: ..:|:.||..:.           .:||:      |.|.||             .:.|.:|
Human   103 RKKLPAGNSVSPPSAES-----------NSPPKEVNIKPGNNVRP-------------AKSKKLN 143

  Fly   428 KKVQCNLDY--------ISPP--------------------RENFPEKYCYT------------- 451
            |.|:.:|..        :.||                    ::.:   ||.|             
Human   144 KLVENSLSISNPGLFTSLGPPLRSTTCHRCGLFGSLRCSQCKQTY---YCSTACQRRDWSAHSIV 205

  Fly   452 ---------------------VSIGGQNVAEAMVAKGLATCVRYRQDDDQRS------------- 482
                                 |.:..::.....|.|.:|.........|.||             
Human   206 CRPVQPNFHKLENKSSIETKDVEVNNKSDCPLGVTKEIAIWAERIMFSDLRSLQLKKTMEIKGTV 270

  Fly   483 -------SAYDQLIAAE-----QQAIKGLKGLHA---KKDNATLR----VNDLTVDHSRIKVQYL 528
                   ..|.||.::|     .|....||..:|   :||...::    :...|||.        
Human   271 TEFKHPGDFYVQLYSSEVLEYMNQLSASLKETYANVHEKDYIPVKGEVCIAKYTVDQ-------- 327

  Fly   529 PSWQRAL-------RTEAIVEFVASGS--------------RLRIFVPKDSCLVTFLLAGISCPR 572
             :|.||:       :.:|.|.::..|:              .:.:|.|   |.:...:|      
Human   328 -TWNRAIIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPP---CAIKCFVA------ 382

  Fly   573 SSRPALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWL----WTDSGANLS 633
                  |.:|| ||. :..:.:..|:..::::..|:.|  .|.....|:.:.    ..:||..|.
Human   383 ------NVIPA-EGN-WSSDCIKATKPLLMEQYCSIKI--VDILEEEVVTFAVEVELPNSGKLLD 437

  Fly   634 VALVEEGLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAER 698
            ..|:|.|..              ||.:...:|  |:|...:..|:|.|..|      |:.:|.::
Human   438 HVLIEMGYG--------------LKPSGQDSK--KENADQSDPEDVGKMTT------ENNIVVDK 480

  Fly   699 -----KVNYENV------IVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTPKR 752
                 ||...||      :|..|.....||.|.::||.||..|.:.|.......||.:..| |..
Human   481 SDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQLPPRSDFY-PAI 544

  Fly   753 GDLVAAQFTLDNQWYRAKVERVQGSNATVL--YIDYGNKETLPTNRLAALPPAFSSEKPYATEYA 815
            ||:..|||:.|:|||||.| ....|..:||  |:||||.|.|...||..:.|........|.:..
Human   545 GDICCAQFSEDDQWYRASV-LAYASEESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCV 608

  Fly   816 LALVALPTDNEDKEEALRAFSEDVLNHKVQLNVELKVTGSPNLATLRD--PTTKVDFGKQLVAEG 878
            ||.|. |:......||:....:.|.|..:.:.|..|:..| :|..|.|  .|..|...|.|:..|
Human   609 LAGVK-PSLGIWTPEAICLMKKLVQNKIITVKVVDKLENS-SLVELIDKSETPHVSVSKVLLDAG 671

  Fly   879 LVLAEQ 884
            ..:.||
Human   672 FAVGEQ 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_001261195.1 SNc 23..166 CDD:214615
SNc 195..333 CDD:214615 19/92 (21%)
SNc 346..504 CDD:320778 39/251 (16%)
SNc 538..672 CDD:214615 28/151 (19%)
TUDOR 697..817 CDD:306940 45/132 (34%)
SNc 767..914 CDD:320778 39/122 (32%)
TDRD1NP_001372292.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..66 18/83 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..138 17/85 (20%)
zf-MYND 170..206 CDD:396356 3/38 (8%)
Tudor_TDRD1_rpt1 268..396 CDD:410479 28/153 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 450..469 5/20 (25%)
Tudor_TDRD1_rpt2 517..598 CDD:410480 34/82 (41%)
TUDOR 715..832 CDD:395449
Tudor_TDRD1_rpt4 944..1059 CDD:410482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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