DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tudor-SN and Stk31

DIOPT Version :10

Sequence 1:NP_612021.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:XP_038964060.1 Gene:Stk31 / 500120 RGDID:1564384 Length:1022 Species:Rattus norvegicus


Alignment Length:247 Identity:57/247 - (23%)
Similarity:102/247 - (41%) Gaps:45/247 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 LAEVHFSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKVNYENV 705
            :|..|...::|.|....|:                 ...|....:.|:...:||        |:|
  Rat     1 MARQHLVRKRSVYPEAQKL-----------------RRFPGLVQMDEDTHYNKV--------EDV 40

  Fly   706 IVTEITETLTFFAQSVESGSKLESLMSKL-----HADFQSNPPIAGSYTPKRGDLVAAQFTLDNQ 765
            :.:.:.:.:||:||:|.....:..:...|     ||:     .:.|:..||:  :....|:.|..
  Rat    41 VGSHVEDAVTFWAQNVSRNKDIMKIGCSLSEVCPHAN-----SVFGNLDPKK--IYGGLFSEDKC 98

  Fly   766 WYRAKV-ERVQGSNATVLYIDYGNKETLPTNRLAALPP--AFSSEKPYATEYALALVALPTDNED 827
            |||.|| :.:......|.||||||.|.|..:.:..:||  .|||   .|.:|.|..:.:|:..|.
  Rat    99 WYRCKVLKTISDDKCLVRYIDYGNTEILNRSDIVEIPPELQFSS---IAKKYRLWGLQIPSGQEV 160

  Fly   828 KE-EALRAFSEDVLNHKVQLNVELKVTGSPNLATLRDPTTKVDFGKQLVAEG 878
            .: :..|.|...::..| ::.:.:|.|........:.....||.|:::..:|
  Rat   161 TQFDQGRTFLGSLIFEK-EIKMRIKATYQDGTVIAQAEYGTVDIGEEVAKKG 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_612021.1 SNc 23..166 CDD:214615
SNc 195..333 CDD:214615
SNc 346..504 CDD:469627
SNc 538..672 CDD:214615 5/30 (17%)
Tudor_TDRD11 723..805 CDD:410504 24/89 (27%)
YncB <868..926 CDD:441134 4/11 (36%)
Stk31XP_038964060.1 Tudor_TDRD8 65..139 CDD:410501 24/80 (30%)
SPS1 807..>926 CDD:440281
Blue background indicates that the domain is not in the aligned region.

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