DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tudor-SN and krimp

DIOPT Version :9

Sequence 1:NP_001261195.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster


Alignment Length:775 Identity:137/775 - (17%)
Similarity:224/775 - (28%) Gaps:317/775 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 VVESIVREGLVSVRREGRPTAEQQTLIELEDQARAAGRGKWSPTASAADKVRNIKWSHENPAHLV 189
            |||:......|........|::.|:|:..:...:..|.|..:..:.:...:.| .|..|||..: 
  Fly   207 VVETEKANNPVRSEASAPATSDNQSLLAAKQGTQTIGTGICNKISKSTINMPN-NWQLENPTEV- 269

  Fly   190 DIYGGNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVKVPFADEAR 254
                   ..|.||.|.                                        |:|.:...|
  Fly   270 -------TAASIEKVN----------------------------------------KLPKSPRNR 287

  Fly   255 YYVE----TRLLQRDVEIRLESVNNSNFIGTILYPKGNIAESLL-----REGLAKCVDWSMAVMK 310
            :.:.    |...:||       :.|........:|:..|..::|     .:..|....|.     
  Fly   288 FLLPPKGGTETTRRD-------IYNQILKDMAAFPENTIVTAVLASVDVTDNCAYVAKWD----- 340

  Fly   311 TGTDKL-RAAERFAKEKRLRQWQDYQAKTPAFNSKEKDFSGTVVEVFNGDAINVRLSNGQVKKVF 374
            ..:|:: :..:|....:.|.|..||               |.:..|.  |:|     |..:.::.
  Fly   341 ESSDRIKKVLQRQLPLQELDQLPDY---------------GDIFAVL--DSI-----NNIITRIT 383

  Fly   375 FSSIRPPRDQRAVVGTDGEEIVKAPPRGKNYRPLYEIPHMFDAREFL------RKKLINKKVQCN 433
            .:|........|.:...||.|                 | ||..|.:      .|:|..:.::| 
  Fly   384 INSSSAGGGYDAYLIDFGEHI-----------------H-FDGNETIFKLPDDIKRLPAQAIRC- 429

  Fly   434 LDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKG 498
             |.|:....|.   :|:                 :.|.::.|..::..|:    |:|  :..|..
  Fly   430 -DLINCDIANM---HCF-----------------VNTYIKIRVHENNNST----LVA--EPVIDR 467

  Fly   499 LKGLHAKKDNATLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTF 563
            |.  ...|.|.|.....:|.|...:..:...|....|:  |::.          |.|||...:  
  Fly   468 LS--RPTKTNTTKYPAGITEDDMAMLNEIDESTSDPLK--AVLG----------FRPKDEQRI-- 516

  Fly   564 LLAGISCPRSSRPALNGVPAQEG-------EPFGDEALTFTRE--RVLQR---DVSVHIDTTDKA 616
                  | |...|.|||  ..:|       |||.....|...|  |.|..   |.:||.:.    
  Fly   517 ------C-RHYDPKLNG--CFKGNNCRFAHEPFAPNGATKDVELARALPETIFDTTVHFEI---- 568

  Fly   617 GSSVIGWLWTDSGANLSVALVEEGLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEVPK 681
             .|::|.|.|                   |....:|.|.|.      ...:...:|..  ::||:
  Fly   569 -GSIVGILIT-------------------FINGPTEVYGQF------LDGSPPLVWDK--KDVPE 605

  Fly   682 EKTVTEEEKEDKVVAERKVNYENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAG 746
            .|..                                                    |:|.|.:. 
  Fly   606 NKRT----------------------------------------------------FKSKPRLL- 617

  Fly   747 SYTPKRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAALPPAFSSEKPYA 811
                   |:|.|.:: |..:|||::.....|...:.|:||||.|.:|.:.||             
  Fly   618 -------DIVLALYS-DGCFYRAQIIDEFPSEYMIFYVDYGNTEFVPLSCLA------------- 661

  Fly   812 TEYALALVALPTDNEDKEEALRAFSEDV--------LNHKVQ-----------LNVELKV 852
                      |.:|.|..:..|.||..:        |.|:..           ||.|:.|
  Fly   662 ----------PCENVDSFKPHRVFSFHIEGIVRSKNLTHQKTIECIEYLKSKLLNTEMNV 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_001261195.1 SNc 23..166 CDD:214615 9/40 (23%)
SNc 195..333 CDD:214615 20/147 (14%)
SNc 346..504 CDD:320778 28/163 (17%)
SNc 538..672 CDD:214615 30/145 (21%)
TUDOR 697..817 CDD:306940 20/119 (17%)
SNc 767..914 CDD:320778 25/105 (24%)
krimpNP_611103.2 TUDOR 568..679 CDD:278965 38/226 (17%)
TUDOR 618..662 CDD:119391 17/67 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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