DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tudor-SN and tej

DIOPT Version :9

Sequence 1:NP_001261195.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_610950.2 Gene:tej / 36590 FlyBaseID:FBgn0033921 Length:559 Species:Drosophila melanogaster


Alignment Length:276 Identity:58/276 - (21%)
Similarity:99/276 - (35%) Gaps:79/276 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   664 AKAAKKNIWT--NYVEEVPKEKT------VTEEEKEDKVVAERKVNYENVIVTEITETLTFFAQS 720
            :|:.|.|.|:  :..:|..||:.      :|.|.|::|...|....:||:.|            .
  Fly   187 SKSLKVNDWSQKDRKQEPSKERNNQKYPKITTENKQEKETEELAQAFENLSV------------D 239

  Fly   721 VESGSKLESLMSKLHAD----FQSNPPIAGSYTPKRGDLVAAQFTLDNQWYRAKVERVQGSNATV 781
            |......|.|..:::.|    |..:|.|.|....|..:.|...|           :.|......:
  Fly   240 VAPTDHQEKLKCEIYEDNEDEFVRDPFIYGEVKEKEDEAVVLAF-----------DAVSEDGFDL 293

  Fly   782 LYIDYGNKETLPTNRLAALPPAFSSEKPYATEYALALVALPTDNEDKEEALRAFSEDVLNHKVQL 846
            |        ::.|.:..|:.|....|.  ...||      .:|:.:.|.|:.|::.|   |:| |
  Fly   294 L--------SMTTTQQNAVKPLDPPED--CLHYA------SSDDGEDENAIPAYAVD---HRV-L 338

  Fly   847 NVELKVTGSPNLATL--RDPTTKVDFGKQLVAEGLVLAEQRGERKLKELVDQYKAAQEAARVAHL 909
            :|:.......:..||  ||            .|.::..:||...:|..||:.:          :.
  Fly   339 DVDYPRDAVRSAFTLPARD------------IESIIELQQRIRVQLVSLVNPH----------NF 381

  Fly   910 AIWKYGDITQDDAPEF 925
            ..|.|.|..:|...:|
  Fly   382 NFWIYNDDFKDYEAQF 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_001261195.1 SNc 23..166 CDD:214615
SNc 195..333 CDD:214615
SNc 346..504 CDD:320778
SNc 538..672 CDD:214615 3/7 (43%)
TUDOR 697..817 CDD:306940 23/123 (19%)
SNc 767..914 CDD:320778 28/148 (19%)
tejNP_610950.2 LOTUS_TDRD_OSKAR 7..93 CDD:193586
TUDOR 379..488 CDD:278965 5/29 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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