DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tudor-SN and snd1

DIOPT Version :9

Sequence 1:NP_001261195.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_878285.3 Gene:snd1 / 324404 ZFINID:ZDB-GENE-030131-3124 Length:913 Species:Danio rerio


Alignment Length:941 Identity:466/941 - (49%)
Similarity:631/941 - (67%) Gaps:56/941 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ATAAGAAKDAPPAPTKSLS-GIVKQVLSGDTVVIRA-TKGAPPPEKQITFSHVLAPKLARRPGAG 70
            |:|..|...:..|....|. ||||.||||..:::|. .:|.||||:||..|::.|..||||...|
Zfish     2 ASAVPAQVQSSQASAPQLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGALARRAIQG 66

  Fly    71 GDETK---DEPWAWESREFLRKKLIGVEVTFTFDKPANSNREYGFVWIGKDKETGENVVESIVRE 132
            ..:||   |||||:::|||:|||:||.||.||.:......||||.|::||| .:|||:.||:|.|
Zfish    67 QPDTKDTPDEPWAFQAREFMRKKVIGKEVCFTVENKTPQGREYGMVYLGKD-TSGENIAESLVAE 130

  Fly   133 GLVSVRREG----RPTAEQQTLIELEDQARAAGRGKWSPTASAADKVRNIKWSHENPAHLVDIYG 193
            ||..|||||    .|  ||..|.:|||||:::.:|.|| ....:..:|::|::.|||.:.||...
Zfish   131 GLAMVRREGIRGNNP--EQVRLCDLEDQAKSSKKGLWS-EGGGSHTIRDLKYTIENPRNFVDSLH 192

  Fly   194 GNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGK--PDLSVKVPFADEARYY 256
            ..||.|||||||||..|||.||||::.:|:|:|||:.|..|.:|||.  |:     |||.||:::
Zfish   193 QKPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSGIKSPTFKREADGSETPE-----PFAAEAKFF 252

  Fly   257 VETRLLQRDVEIRLESVNNSNFIGTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDKLRAAER 321
            .|:|||||||:|.|||..|...:||||:|.|||.|.||:||.|:||||||||...|.:|||||||
Zfish   253 TESRLLQRDVQIILESCPNQVILGTILHPNGNITELLLKEGFARCVDWSMAVYTQGAEKLRAAER 317

  Fly   322 FAKEKRLRQWQDYQAKTPAFNSKEKDFSGTVVEVFNGDAINVRLSNGQVKKVFFSSIRPPRDQRA 386
            .|||:::|.|:||.|.|...:.|::.|...|::|.|.|||.|:|::|:.|.:..|||||||    
Zfish   318 SAKERKVRIWKDYVAPTANLDQKDRQFVAKVMQVVNADAIVVKLNSGEYKTIHLSSIRPPR---- 378

  Fly   387 VVGTDGEEIVKAPPRGKNYRPLYEIPHMFDAREFLRKKLINKKVQCNLDYISPPRE-------NF 444
               .:|||  |...:.|.:||||:||:||:||||||||||.|||...:|||.....       .|
Zfish   379 ---LEGEE--KNKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRAATNAMEMGVPAF 438

  Fly   445 PEKYCYTVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNA 509
            ||:.|.||:|||.|:|||:|:|||||.:|||||||||||.||:|:|||.:|||..||||:||:..
Zfish   439 PERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP 503

  Fly   510 TLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAGISCPRSS 574
            ..||.|::.:..:.| |:.|..|||.|:||:||:|.|||||::::||::||:|||||||.|||.|
Zfish   504 IHRVADISGETQKAK-QFFPFLQRAGRSEAVVEYVFSGSRLKLYMPKETCLITFLLAGIECPRGS 567

  Fly   575 RPALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGANLSVALVEE 639
            |....|:  |..||:.:||:.||:|.||||:|.|.:::.|||| :.||||..: |.||||||||.
Zfish   568 RNMPGGM--QVAEPYSEEAMLFTKELVLQREVEVEVESMDKAG-NFIGWLHIE-GVNLSVALVEN 628

  Fly   640 GLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKT--VTEEEKEDKVVAERKVNY 702
            .|::|||:||:|.||:.|..||:.|:..|:.:|.|| ||.|||:.  |||.:       ||...|
Zfish   629 ALSKVHFTAERSSYYKTLVSAEESARQRKEKLWANY-EEKPKEEVAQVTEAK-------ERVAKY 685

  Fly   703 ENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTPKRGDLVAAQFTLDNQWY 767
            .:|.|||||:.|.|:||.||:|:|||:||..:..:..:.||:.||:.|:||:...|:|. |.:||
Zfish   686 RSVYVTEITDGLHFYAQDVETGTKLENLMESMRGEIAAQPPVEGSFAPRRGEFCIAKFA-DGEWY 749

  Fly   768 RAKVERVQG-SNATVLYIDYGNKETLPTNRLAALPPAFSSE--KPYATEYALALVALPTDNEDKE 829
            ||:||:|:. :...|.||||||:|.|.:.||||||||||:.  .|.|||||.|.:.:|.|.:.:.
Zfish   750 RARVEKVESPAKVHVFYIDYGNREVLSSTRLAALPPAFSTRTLPPQATEYAFAYIQVPQDEDARA 814

  Fly   830 EALRAFSEDVLNHKVQLNVELKVTGSPNLATLRDPTTKVDFGKQLVAEGLVLAEQRGERKLKELV 894
            :|:.:...|:.|.:..||||...:..|.: ||:...||.|.|..||.||:|:.:.|.|:.|:::|
Zfish   815 DAVDSVVRDIHNTQCLLNVEYSGSVCPQV-TLQFADTKEDVGLGLVKEGMVMVDIRKEKYLQKMV 878

  Fly   895 DQYKAAQEAARVAHLAIWKYGDITQDDAPEF 925
            .:|..|||:|:.|.|.||:|||...|||.||
Zfish   879 TEYLNAQESAKSARLNIWRYGDFRDDDADEF 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_001261195.1 SNc 23..166 CDD:214615 75/151 (50%)
SNc 195..333 CDD:214615 82/139 (59%)
SNc 346..504 CDD:320778 89/164 (54%)
SNc 538..672 CDD:214615 72/133 (54%)
TUDOR 697..817 CDD:306940 63/122 (52%)
SNc 767..914 CDD:320778 66/149 (44%)
snd1NP_878285.3 SNc 18..167 CDD:214615 77/152 (51%)
SNc 26..167 CDD:238102 72/144 (50%)
SNc 194..329 CDD:214615 82/139 (59%)
SNc 202..329 CDD:238102 76/131 (58%)
SNc 342..498 CDD:214615 89/164 (54%)
SNc 351..499 CDD:238102 88/156 (56%)
SNc 528..663 CDD:214615 74/138 (54%)
SNc 536..663 CDD:238102 69/130 (53%)
TUDOR 680..802 CDD:278965 63/122 (52%)
TUDOR 732..787 CDD:197660 29/55 (53%)
SNc 749..898 CDD:214615 66/149 (44%)
SNc <847..898 CDD:294094 22/50 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594963
Domainoid 1 1.000 122 1.000 Domainoid score I5576
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8665
Inparanoid 1 1.050 798 1.000 Inparanoid score I483
OMA 1 1.010 - - QHG53811
OrthoDB 1 1.010 - - D211699at33208
OrthoFinder 1 1.000 - - FOG0004476
OrthoInspector 1 1.000 - - oto41599
orthoMCL 1 0.900 - - OOG6_102097
Panther 1 1.100 - - LDO PTHR12302
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1361
SonicParanoid 1 1.000 - - X3762
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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