Sequence 1: | NP_001261195.1 | Gene: | Tudor-SN / 38045 | FlyBaseID: | FBgn0035121 | Length: | 926 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038949233.1 | Gene: | Rnf17 / 305908 | RGDID: | 1310486 | Length: | 1650 | Species: | Rattus norvegicus |
Alignment Length: | 1003 | Identity: | 183/1003 - (18%) |
---|---|---|---|
Similarity: | 328/1003 - (32%) | Gaps: | 359/1003 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 PAPTKSLSGIVKQV--LSGDTVVIRATKGAPPPEKQITFSHVLAPK---------------LARR 66
Fly 67 PGAGGDETKDEPWAWESREFLRKKLIGVEVTFTFDKPANSNREYG-FVWIGKDK-------ETGE 123
Fly 124 NVVESI--VREGLVSVRREGRPTAEQQTLIELEDQARAAGRGKWSPTASAADKVRNIKWSHENPA 186
Fly 187 HLVDIYGGNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKL---DADGKPDLSVKVP 248
Fly 249 FADEARYYVETRLLQRDVEIRLESVNNSNFIGTILYPKGNIAESLLREG---LAKCVDWSMAVMK 310
Fly 311 TGTDKLRAAERFAKEKRLRQWQDYQAKTPAFNSKEKDFSGTVVEVFNGDAINVRLSNGQVKKVFF 375
Fly 376 SSIRPPRDQR--------AVVGTDGEEIVKAPPRGKNYRPLYEIPHMFDAREFLRKKLINKKVQC 432
Fly 433 NLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIK 497
Fly 498 GLKGLHAKKDNATLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDS---C 559
Fly 560 LVTFLLAGISCPRSSRPALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHI-DTTDKAGSSVIGW 623
Fly 624 LWTDSGANLSVALVEEGLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEE 688
Fly 689 EK-EDKVVAERKVNYENVIVTEI-----------------------------TETLTFFAQSVES 723
Fly 724 --------------------GSKLESLMSKLHADFQSNPPIAGSYTPKRGDLVAAQFTLDNQWYR 768
Fly 769 AKVERVQGSN---ATVLYIDYGNKETLPTNRLAALPPAFSSEKPYATEYALALVALPTDNEDKEE 830
Fly 831 ALRAFSEDVLNHKVQLNVELKVTGSPNLATLRDPTTKVDF--GKQLVAEGLVLAEQRGERKLKEL 893
Fly 894 VDQYKAAQEAARVAHLAIWKYGDITQDD 921 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tudor-SN | NP_001261195.1 | SNc | 23..166 | CDD:214615 | 30/169 (18%) |
SNc | 195..333 | CDD:214615 | 26/143 (18%) | ||
SNc | 346..504 | CDD:320778 | 21/165 (13%) | ||
SNc | 538..672 | CDD:214615 | 26/137 (19%) | ||
TUDOR | 697..817 | CDD:306940 | 32/171 (19%) | ||
SNc | 767..914 | CDD:320778 | 34/151 (23%) | ||
Rnf17 | XP_038949233.1 | PHD_SF | 30..72 | CDD:419867 | |
BBC | 137..>242 | CDD:128778 | |||
Tudor_TDRD4_rpt1 | 490..566 | CDD:410485 | |||
Tudor_TDRD4_rpt2 | 728..823 | CDD:410486 | |||
Tudor_TDRD4_rpt3 | 968..1049 | CDD:410487 | 18/91 (20%) | ||
Tudor_TDRD4_rpt4 | 1247..1314 | CDD:410488 | 17/124 (14%) | ||
Tudor_TDRD4_rpt5 | 1504..1608 | CDD:410489 | 27/129 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1525 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |