DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tudor-SN and Tdrd5

DIOPT Version :10

Sequence 1:NP_612021.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001128213.1 Gene:Tdrd5 / 214575 MGIID:2684949 Length:1040 Species:Mus musculus


Alignment Length:750 Identity:140/750 - (18%)
Similarity:238/750 - (31%) Gaps:252/750 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 VKAIIEHVRDGST----VRAFLLPDFHYITLMISGIR---------------CPGVKLDADGKPD 242
            :::::...:||.|    .:.:||...:::.|.|.|.|               |||    .||...
Mouse    15 IRSLLISTKDGLTPQQLEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVSVCPG----GDGTVI 75

  Fly   243 LSVKVPFADEARYYVETRLLQRDVEIRLESVNNSNFIGTILYPKGN------------------- 288
            |.. :|  ||:...:.:.:.:   :.|...|.||       .|||.                   
Mouse    76 LKA-IP--DESTKGIASLVAK---QRRSHKVRNS-------MPKGRPSICSGRVPYRGRVPPILP 127

  Fly   289 -IAESLLREGLA-----------------------------------KCVDWSMAVMKTGTDKLR 317
             :.:|.|::.||                                   ......::|.:|....|.
Mouse   128 AVVKSELKDLLALSPVLLSDFEKAFARRFGRSFQYMQYGFLSMFEVLNAASDVISVEQTRAGSLL 192

  Fly   318 AAERFAKEKRLRQWQDYQAKTPAFNSKEKDFSGTVVEVFNGDAINVRLSNGQVKKVFF----SSI 378
            ..::...|.:.|.|...:..|..|..|::....|               ...|.|..|    |::
Mouse   193 TLKK
SVSEDKQRGWPAGKVFTQPFRMKQQGSYST---------------GFPVMKAHFSQPISNM 242

  Fly   379 RPPRDQRAVVGTDGEEIVKAPPRGKNYRPLYEIPHMFDAREFLRKKLINKKVQCNLDYISPPREN 443
            .||:...::..|.....|:| .|..:...|.::...|       |.:|.:        |.|....
Mouse   243 EPPKQVLSMAKTPTFNSVEA-SRLNHTEKLNQLESTF-------KSVIAQ--------IGPGGTV 291

  Fly   444 FPE---KYCYTVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAK 505
            .||   |..:.||...|.:   .::|.|...               :|...||.:.|.|..|   
Mouse   292 DPELKRKIQFVVSKFPQGL---FISKLLGEF---------------ELTFKEQLSPKQLGFL--- 335

  Fly   506 KDNATLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLV--------- 561
              |.|..|..|:   ..::|::....|..|..:|.::.:.||..|...  ::||||         
Mouse   336 --NVTELVGALS---DILRVEFSEERQDLLVFDADLKPLPSGGPLSSV--RNSCLVQPDKKTEAN 393

  Fly   562 --TFLLAGISCPRSSRPALNGVPAQ----------EGEPFGDEALTFTRERVLQRDVSVHIDTTD 614
              |..|        ||.:|:.|..:          :.||   |...:.:..::.:.:.:.::|..
Mouse   394 PWTSSL--------SRNSLSTVAVKKTTWDCPLKNQKEP---EQKIYKKPNLVVKPLQLQVETNK 447

  Fly   615 KAGSSVIGWLWTDSGANLSVALVEEGLAEVHFSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEV 679
            ..             .:||||                    ...|..|..:|.|       :..:
Mouse   448 PQ-------------LSLSVA--------------------NHDIPPDAVRAKK-------LCRL 472

  Fly   680 PKEKTVTEEEKEDKVVAERKVNYENVIVTEITETLTFFAQ--SVESGSKLESLMSKLHADFQ--- 739
            |...|.|               ...|.|..|.....|:.:  |.:|...||.:|.::...:.   
Mouse   473 PPLDTST---------------LVGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQL 522

  Fly   740 -SNPPIAGSYTPKRGDLVAAQFTLDNQWYRAKVERVQG-SNATVLYIDYGNKETLPTNRLAALPP 802
             |:..|...|..:.|.|...:.:.|..|||..:.|:.| ....|.|.|:||..|:..:.|..|..
Mouse   523 VSDRYIMPEYFIQPGHLCCVKISEDKWWYRVIIHRILGKKEVEVFYPDFGNIGTVQKSSLRFLKC 587

  Fly   803 AFSSEKPYATEYALALVALPTDNEDKEEALRAFSE 837
            .::.....|...:||.|. |.:......|:..|.:
Mouse   588 CYTKLPAQAIPCSLAWVR-PAEEHWTARAILHFQK 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_612021.1 SNc 23..166 CDD:214615
SNc 195..333 CDD:214615 35/209 (17%)
SNc 346..504 CDD:469627 31/164 (19%)
SNc 538..672 CDD:214615 26/154 (17%)
Tudor_TDRD11 723..805 CDD:410504 23/86 (27%)
YncB <868..926 CDD:441134
Tdrd5NP_001128213.1 LOTUS_1_TDRD5 4..98 CDD:193599 19/92 (21%)
LOTUS_2_TDRD5 127..196 CDD:193589 7/68 (10%)
LOTUS_3_TDRD5 292..365 CDD:193590 21/98 (21%)
Tudor_TDRD5 484..601 CDD:410490 28/116 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..891
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..975
Blue background indicates that the domain is not in the aligned region.

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