DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyx and asb12a

DIOPT Version :9

Sequence 1:NP_612015.1 Gene:pyx / 38037 FlyBaseID:FBgn0035113 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001119848.1 Gene:asb12a / 322927 ZFINID:ZDB-GENE-030131-1647 Length:305 Species:Danio rerio


Alignment Length:180 Identity:52/180 - (28%)
Similarity:89/180 - (49%) Gaps:27/180 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 TSLHCAASSKSVECILLLLRRKASIN-IGIEKRSALHYAIDVNAVDCVEILLKYGADPNTPQVYT 232
            |.|..|||...:.|:.|||...|.:: :.::.::.|..|:....:.||..||:.||:||...:..
Zfish    55 TPLRMAASKGHLRCLQLLLAHGADVDRLDVKAQTPLFTAVCGRYLSCVLALLRAGANPNGSHLNN 119

  Fly   233 ETPLHTASAAGFAKCVQLLLSHNADVRSQFGEGKVT-----------ALHLAAENDYVECARLLL 286
            .:|:.||:..|..:.::.||.|.|:|.::   .|||           .|:|:|...:::|.::||
Zfish   120 SSPVLTAAREGDPEILRQLLQHGAEVNAR---SKVTLWASGVAVCSGPLYLSAIYGHLDCFKMLL 181

  Fly   287 EHRAE---------VDCRNASHQTPLHLACLSQSIGT--VDLLISYGANV 325
            ...|:         ::.|....:|.:.| ||....|.  :.|||.:||||
Zfish   182 LFGADPNYNSPEEKLNGRATQQKTVMEL-CLRHGCGVEYIQLLIDFGANV 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyxNP_612015.1 Ank_4 99..153 CDD:290365
ANK repeat 102..130 CDD:293786
ANK 127..252 CDD:238125 24/83 (29%)
ANK repeat 132..163 CDD:293786
Ank_2 137..226 CDD:289560 18/57 (32%)
ANK repeat 166..196 CDD:293786 10/27 (37%)
ANK 198..319 CDD:238125 36/142 (25%)
ANK repeat 200..229 CDD:293786 10/28 (36%)
Ank_2 203..296 CDD:289560 29/112 (26%)
ANK repeat 231..262 CDD:293786 9/30 (30%)
ANK 268..387 CDD:238125 21/80 (26%)
ANK repeat 268..296 CDD:293786 8/47 (17%)
Ank_2 270..364 CDD:289560 20/67 (30%)
ANK repeat 298..329 CDD:293786 12/30 (40%)
ANK repeat 331..364 CDD:293786
Ank_5 353..404 CDD:290568
ANK repeat 366..396 CDD:293786
Ion_trans 556..734 CDD:278921
asb12aNP_001119848.1 ANK 55..181 CDD:238125 36/128 (28%)
ANK repeat 55..83 CDD:293786 10/27 (37%)
Ank_2 57..148 CDD:289560 28/90 (31%)
ANK repeat 85..116 CDD:293786 10/30 (33%)
ANK repeat 118..148 CDD:293786 9/29 (31%)
Ank_4 119..181 CDD:290365 16/64 (25%)
ANK repeat 162..200 CDD:293786 7/37 (19%)
Ank_2 165..>230 CDD:289560 18/65 (28%)
ANK repeat 202..228 CDD:293786 8/26 (31%)
SOCS 257..297 CDD:295349
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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