DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyx and Asb1

DIOPT Version :9

Sequence 1:NP_612015.1 Gene:pyx / 38037 FlyBaseID:FBgn0035113 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_038939690.1 Gene:Asb1 / 316628 RGDID:1310760 Length:339 Species:Rattus norvegicus


Alignment Length:217 Identity:56/217 - (25%)
Similarity:104/217 - (47%) Gaps:39/217 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 TSLHCAASSKSVECILLLLRRKASIN-IGIEKRSALHYAIDVNAVDCVEILLKYGADPNTPQVYT 232
            |.|..||::....|:..|:|:.|.:: :.::.::||:.|:....::..||||:.|||||..:.:.
  Rat    84 TPLRIAATAGHGNCVDFLIRKGAEVDLVDVKGQTALYVAVVNGHLESTEILLEAGADPNGSRHHR 148

  Fly   233 ETPLHTASAAGFAKCVQLLLSHNADV----------RSQFGEGKVTA-----LHLAAENDYVECA 282
            .||::.||..|....::.|:.:.|||          |..|.. ::|:     |:::|....::|.
  Rat   149 STPVYHASRVGRGDILKALIRYGADVDVNHHLTPDTRPPFSR-RLTSLVVCPLYISAAYHNLQCF 212

  Fly   283 RLLLEHRAEVD--CRNASHQTPLHL---ACLSQSI-------GTVDLLISYGANVNAVYRD---- 331
            ||||:..|..|  |....:....:.   .|:..::       ..|.||:.:|||:|.|..:    
  Rat   213 RLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVLRHGCEAAFVSLLVEFGANLNLVKWESLGP 277

  Fly   332 ---GRTALH---AAIVKQSRSL 347
               ||..:.   ..:.|::||:
  Rat   278 EARGRRKIDPEALQVFKEARSI 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyxNP_612015.1 Ank_4 99..153 CDD:290365
ANK repeat 102..130 CDD:293786
ANK 127..252 CDD:238125 25/83 (30%)
ANK repeat 132..163 CDD:293786
Ank_2 137..226 CDD:289560 18/57 (32%)
ANK repeat 166..196 CDD:293786 8/27 (30%)
ANK 198..319 CDD:238125 37/147 (25%)
ANK repeat 200..229 CDD:293786 12/28 (43%)
Ank_2 203..296 CDD:289560 33/109 (30%)
ANK repeat 231..262 CDD:293786 10/40 (25%)
ANK 268..387 CDD:238125 25/107 (23%)
ANK repeat 268..296 CDD:293786 11/34 (32%)
Ank_2 270..364 CDD:289560 24/100 (24%)
ANK repeat 298..329 CDD:293786 8/40 (20%)
ANK repeat 331..364 CDD:293786 5/27 (19%)
Ank_5 353..404 CDD:290568
ANK repeat 366..396 CDD:293786
Ion_trans 556..734 CDD:278921
Asb1XP_038939690.1 Ank_2 26..112 CDD:423045 8/27 (30%)
ANK repeat 45..74 CDD:293786
ANK repeat 83..112 CDD:293786 8/27 (30%)
PHA02875 84..>270 CDD:165206 50/186 (27%)
Ank_2 86..177 CDD:403870 28/90 (31%)
ANK repeat 114..145 CDD:293786 12/30 (40%)
ANK repeat 147..176 CDD:293786 9/28 (32%)
ANK repeat 178..223 CDD:293786 11/45 (24%)
SOCS_ASB1 298..339 CDD:239690 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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