DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pyx and Trpa1

DIOPT Version :9

Sequence 1:NP_612015.1 Gene:pyx / 38037 FlyBaseID:FBgn0035113 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_997491.1 Gene:Trpa1 / 312896 RGDID:1303284 Length:1125 Species:Rattus norvegicus


Alignment Length:934 Identity:226/934 - (24%)
Similarity:360/934 - (38%) Gaps:218/934 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ENVRFSIIENDLKWNSESDPTADVDLLLDKRSISSEANSAG------------------------ 42
            ||...:::....|.|||:     :.:||:|.:...::|..|                        
  Rat   164 ENGNTALMSTCAKDNSEA-----LQILLEKGAKLCKSNKWGDYPVHQAAFSGAKRCMELILAYGE 223

  Fly    43 --VFSDEAHEIFARQQQNQIL------WDLDEVKETLTESPGGKHVVDMVQSGCFLELMTDSADC 99
              .:|.|||..|...::...|      .|||.:|..|             .||..:::| ::|.|
  Rat   224 KTGYSREAHINFVNHKKASPLHLAVQSGDLDMIKMCL-------------DSGAHIDMM-ENAKC 274

  Fly   100 NLALICCSVFGSVENTLFLLKHYNADP---NVADSRGRTPLHFACCRANAPIAKVLLDFGADPNR 161
             :||...:..|:.:....::..|....   |..|....|.||.|....:..:|..|:..|||.|.
  Rat   275 -MALHFAATQGATDIVKLMISSYTGSSDIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINS 338

  Fly   162 WDARKEVTSLHCAASSKSVECILLLLRRKASINI----GIEKRSALHYAIDVNAVDCVEILLKYG 222
            .|:... :.|..|.:|.|...:.|||.:.|.::|    |   |:.||..:.          ..||
  Rat   339 TDSEGR-SPLILATASASWNIVNLLLSKGAKVDIKDHLG---RNFLHLTVQ----------QPYG 389

  Fly   223 ADPNTPQ----------VYTE-----TPLHTASAAGFAKCVQLLLSHNADVRSQFGEGKVTALHL 272
            .....|:          |..|     ||||.|...|....|..||..|..|.|: .:.|.:.||.
  Rat   390 LRNLRPEFLQMQHIKELVMDEDNDGCTPLHYACRQGAPVSVNNLLRFNVSVHSK-SKDKKSPLHF 453

  Fly   273 AAENDYVECARLLLEHRAEVDCRNASH---QTPLHLACLSQSIGTVDLLISYGANVNAVYRDGRT 334
            ||....:...:.||:..::....|...   .||||||..:.....|.||:..||...:.: :|.|
  Rat   454 AASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDH-NGWT 517

  Fly   335 ALHAAIVKQSRSLDCCNALLKAGADVN-----KADNYGYTPLHIAALNEFSSCVYTFIEHGADI- 393
            |||.|      |:......:|...|.|     :.|..|.|.||.||....:..|...:.:.||| 
  Rat   518 ALHHA------SMGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADIL 576

  Fly   394 -----------------------TARTDGRVSALSFIVRRTP----------EIIPKLMQ-KLDS 424
                                   |.|:......|......:|          |.:|:.|: .||.
  Rat   577 LNKKQASFLHIALHNKRKEVVLTTIRSKRWDECLQVFTHDSPSNRCPIMEMVEYLPECMKVLLDF 641

  Fly   425 SIKANDQEIGDVDCQIKLDFRLLVPSSSMDRGET----------ELLLSLIEVGQKRILMHPLCE 479
            .:..:.::....|..|:.:|:.|....||.:..|          .:|..:::..:..:|.||:|.
  Rat   642 CMIPSTEDKSCQDYHIEYNFKYLQCPLSMTKKVTPTQDVIYEPLTILNVMVQHNRIELLNHPVCR 706

  Fly   480 TFLFLKWRRIR-KFFLMSLAYHTLFVILFTFYVIWVYVRCCKKEELCVAPGY------------- 530
            .:|.:||.... :..:|:|..:.|.:|..|..|:            .:.||.             
  Rat   707 EYLLMKWCAYGFRAHMMNLGSYCLGLIPMTLLVV------------KIQPGMAFNSTGIINETIS 759

  Fly   531 -----VSTIGY--LVIILNLILLG------KEVFQMAHGLRGYAKYWENWLQWTIGTGVLLCVTP 582
                 ::|:..  |.|.:.|:.|.      |||.|:....|.|...:.|.|:|.|.|..::.|.|
  Rat   760 THEERINTLNSFPLKICMILVFLSSIFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSMIFVLP 824

  Fly   583 ETVRTDDLTAVPVWQHHVAAIVILLVWLELMMLVGRFPIFGVYVQMFTKVAVNFAKFLLAYICLL 647
            ..:   |:.|...||  ..||.|...|:..::.:.||...|:::.|...:.....:....:|.||
  Rat   825 LFL---DIPAYMQWQ--CGAIAIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLL 884

  Fly   648 VAFGLSFAVLFNDYPAFENITWSFLKSITMMSGELEFED-----IFYGDYAVKFPVTAHIIFLSF 707
            :||||||.||.|...||.....|.:::.:||.|::.:.|     :|..:.|  :||......::|
  Rat   885 LAFGLSFYVLLNFQDAFSTPLLSLIQTFSMMLGDINYRDAFLEPLFRNELA--YPVLTFGQLIAF 947

  Fly   708 VLLVTVILTNLMVGLAVSDIQGLQVSATLDRLVRQAELVSRLESLFFSRLLRSAPTNLIQLCKRS 772
            .:.|.::|.||::||||.||..:|..|:|.|:..|.||.:.||.......||..           
  Rat   948 TMFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPFWYLRKV----------- 1001

  Fly   773 ALLRTSRDKLQFTIRPNDPRDNQL 796
                   |:....:.||.||..::
  Rat  1002 -------DQRSTIVYPNRPRHGRM 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyxNP_612015.1 Ank_4 99..153 CDD:290365 12/56 (21%)
ANK repeat 102..130 CDD:293786 5/30 (17%)
ANK 127..252 CDD:238125 38/143 (27%)
ANK repeat 132..163 CDD:293786 10/30 (33%)
Ank_2 137..226 CDD:289560 25/92 (27%)
ANK repeat 166..196 CDD:293786 9/33 (27%)
ANK 198..319 CDD:238125 36/138 (26%)
ANK repeat 200..229 CDD:293786 5/28 (18%)
Ank_2 203..296 CDD:289560 26/107 (24%)
ANK repeat 231..262 CDD:293786 13/35 (37%)
ANK 268..387 CDD:238125 36/126 (29%)
ANK repeat 268..296 CDD:293786 6/27 (22%)
Ank_2 270..364 CDD:289560 28/101 (28%)
ANK repeat 298..329 CDD:293786 11/33 (33%)
ANK repeat 331..364 CDD:293786 10/37 (27%)
Ank_5 353..404 CDD:290568 16/79 (20%)
ANK repeat 366..396 CDD:293786 11/53 (21%)
Ion_trans 556..734 CDD:278921 56/182 (31%)
Trpa1NP_997491.1 ANK 1 63..94
Ank_2 83..>373 CDD:393464 53/229 (23%)
ANK repeat 98..129 CDD:293786
ANK 2 98..127
ANK repeat 131..163 CDD:293786
ANK 3 131..161
ANK 4 165..194 8/33 (24%)
ANK repeat 165..190 CDD:293786 8/29 (28%)
ANK repeat 198..237 CDD:293786 6/38 (16%)
ANK 5 198..227 1/28 (4%)
ANK repeat 239..268 CDD:293786 8/41 (20%)
ANK 6 239..268 8/41 (20%)
ANK 7 272..301 6/29 (21%)
ANK repeat 276..307 CDD:293786 5/30 (17%)
ANK repeat 309..340 CDD:293786 10/30 (33%)
ANK 8 309..338 9/28 (32%)
ANK repeat 342..373 CDD:293786 9/31 (29%)
ANK 9 342..371 8/29 (28%)
ANK repeat 413..444 CDD:293786 12/31 (39%)
ANK 10 413..442 11/28 (39%)
Ank_2 418..507 CDD:372319 27/89 (30%)
ANK repeat 446..480 CDD:293786 8/33 (24%)
ANK 11 446..475 7/28 (25%)
ANK repeat 482..512 CDD:293786 11/29 (38%)
ANK 12 482..511 11/28 (39%)
Ank_2 487..578 CDD:372319 30/97 (31%)
ANK repeat 514..546 CDD:293786 10/37 (27%)
ANK 13 514..543 10/34 (29%)
ANK 14 548..577 10/28 (36%)
ANK repeat 548..573 CDD:293786 7/24 (29%)
Ion_trans <799..975 CDD:366146 56/182 (31%)
Inositolphosphate binding. /evidence=ECO:0000250|UniProtKB:O75762 1048..1054
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D180347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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