DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7028 and PRPF4B

DIOPT Version :9

Sequence 1:NP_001286884.1 Gene:CG7028 / 38032 FlyBaseID:FBgn0027587 Length:912 Species:Drosophila melanogaster
Sequence 2:NP_003904.3 Gene:PRPF4B / 8899 HGNCID:17346 Length:1007 Species:Homo sapiens


Alignment Length:1026 Identity:437/1026 - (42%)
Similarity:576/1026 - (56%) Gaps:169/1026 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SYDSSNNSETEERRAKHKKAKKHKKHKKSSTGKTEKD-RHVHKKQKKAKKRPHRTSESTNESDAP 69
            |.|.|.|..:..::.|||...||||||.||  :.:|| :|.||.:.|..||......|..|..:|
Human    32 SEDQSQNKHSRHKKKKHKHRSKHKKHKHSS--EEDKDKKHKHKHKHKKHKRKEIIDASDKEGMSP 94

  Fly    70 -ENAKL---------------------------KLSQNCGL--------SSKFTEIMQKASRNGA 98
             :..||                           |:....||        |.:..||.:|| ||| 
Human    95 AKRTKLDDLALLEDLEKQRALIKAELDNELMEGKVQSGMGLILQGYESGSEEEGEIHEKA-RNG- 157

  Fly    99 DFRVGKPLLPTDPSSLVEEITK----TIQNKM--------------------------LPVLEVA 133
                       :.||.....||    .:.||:                          :.:::..
Human   158 -----------NRSSTRSSSTKGKLELVDNKITTKKRSKSRSKERTRHRSDKKKSKGGIEIVKEK 211

  Fly   134 SSSSESDVPADAASPIILSIIEDELNLEELMRQKALLQARLGAYMSDPEAEDKGDLLPHTHSQQL 198
            ::.|:|.....:.||...|..:|:....:....:...|.::|...|  ..:||..:...:.|:. 
Human   212 TTRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARS--PTDDKVKIEDKSKSKD- 273

  Fly   199 VVHTKS-VLKAVTSVPQPQPSKSAAPL------ATATSKHANIKKSTTHNSNESDVILLDDSSGG 256
              ..|| ::....|..:.:.|:|...|      ..:.||....|:|.|....:.......|:|.|
Human   274 --RKKSPIINESRSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSG 336

  Fly   257 Q--RTPSPTPEK--RRRHASPLPAAPRSRCRR-------DRRSRDRDRSPPRRRASDQQTQVRPR 310
            :  |:||..|.:  :||..||   .||.:.||       ||||: :.:||.|..:..:      |
Human   337 KENRSPSRRPGRSPKRRSLSP---KPRDKSRRSRSPLLNDRRSK-QSKSPSRTLSPGR------R 391

  Fly   311 SRNRNMEDLRQEINRDKQRERRDHSRD----RDRRGLDRPP----PPTDMR---PGRARERD-VR 363
            :::|::|..|:|..|.:....|...||    |..|..|..|    .||..|   |.|.|.|. :|
Human   392 AKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLR 456

  Fly   364 PSRMQRSHSRSKFESD---RRRERERQKDRDRGGGRVGARSGTDNGDRDRYKGSLSEGQNKLDKE 425
            .||..|..|||....|   |.|.|.|::.|.|||.|..:||..   ..|::|||||||. |:::|
Human   457 RSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKV---KEDKFKGSLSEGM-KVEQE 517

  Fly   426 SSDEEVNVNIDILEEDDEERIIELRRKKREELLKKLGTGQESPAPHNSVSYESRSTSQGSSQRER 490
            ||.::...:.|: ||:|||.:||.||.:|:.:::|    .:..|..:::|..|..:|..||.|.|
Human   518 SSSDDNLEDFDV-EEEDEEALIEQRRIQRQAIVQK----YKYLAEDSNMSVPSEPSSPQSSTRTR 577

  Fly   491 PLRTPSPTMPCPNPLISEIPKD-----REDMDN------------STSQKTCSAKEKRNEWDMFA 538
                    .|.|:.::..:..|     ||::|.            :..|...|:::|....|||.
Human   578 --------SPSPDDILERVAADVKEYERENVDTFEASVKAKHNLMTVEQNNGSSQKKLLAPDMFT 634

  Fly   539 DQD--VDSNFDVSRKISPNTIVQNKHQHENPALTDNWDDAEGYYRVRIGEVLDNRYLVNGYTGQG 601
            :.|  ..:.||.:|..:...   .|...|||.|.|||.||||||||.||||||.||.|.||||||
Human   635 ESDDMFAAYFDSARLRAAGI---GKDFKENPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTGQG 696

  Fly   602 VFSNVVRGRDQARGQANVAIKIIRNNEIMHKTGLRELEILKKLNDADPEDRFHCLRLYRHFFHKQ 666
            |||||||.||.||....||:|||||||:|.||||:|||.|||||||||:|:||||||:|||:|||
Human   697 VFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQ 761

  Fly   667 HLCMVFEPLAMNLREVLKKYGKNVGLHIKAVRSYTQQLFLALKLLKKTGILHADIKPDNILVNEN 731
            |||:|||||:||||||||||||:|||||||||||:|||||||||||:..|||||||||||||||:
Human   762 HLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNES 826

  Fly   732 NLILKLCDFGSASAISDNEITPYLVSRFYRSPEIILGIPYDYGIDTWSAGCTIYELYTGKILFSG 796
            ..|||||||||||.::||:|||||||||||:||||:|..||||||.||.|||:||||||||||.|
Human   827 KTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPG 891

  Fly   797 KSNNQMLKFFMDVKGKIPNRIIRKGQFREQHFDQSCNFLYHEIDKLTEREKIVVMPVVKPSRSLQ 861
            |:||.|||..||:|||:||::||||.|::|||||:.||:|.|:||:|||||:.||..:.|::.|.
Human   892 KTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLL 956

  Fly   862 QELIADQNLPDDQHRKVTQLKDLLENMFALDPAKRISLNQALVHPFIQEKM 912
            .:||..|.||:||.:||.||||||:.:..||||||||:||||.|.|||||:
Human   957 ADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7028NP_001286884.1 STKc_PRP4 591..908 CDD:271037 233/316 (74%)
S_TKc 599..908 CDD:214567 227/308 (74%)
PRPF4BNP_003904.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..99 26/68 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..533 113/425 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..583 9/31 (29%)
STKc_PRP4 686..1003 CDD:271037 233/316 (74%)
S_TKc 694..1003 CDD:214567 227/308 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154979
Domainoid 1 1.000 487 1.000 Domainoid score I394
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 649 1.000 Inparanoid score I794
Isobase 1 0.950 - 0 Normalized mean entropy S2103
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003592
OrthoInspector 1 1.000 - - oto89816
orthoMCL 1 0.900 - - OOG6_102293
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R996
SonicParanoid 1 1.000 - - X2065
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1312.770

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