DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7028 and AME3

DIOPT Version :9

Sequence 1:NP_001286884.1 Gene:CG7028 / 38032 FlyBaseID:FBgn0027587 Length:912 Species:Drosophila melanogaster
Sequence 2:NP_194992.1 Gene:AME3 / 829401 AraportID:AT4G32660 Length:400 Species:Arabidopsis thaliana


Alignment Length:435 Identity:125/435 - (28%)
Similarity:200/435 - (45%) Gaps:83/435 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 EDMDNSTSQKTCSAKEKRNEWDMFADQDVDSNFDVSRKI-----SPNTIVQNKHQHENPALTDNW 573
            |.||     |....|..|..||     :..:..:..|.:     |...|:       :|.|.|  
plant     7 ESMD-----KERVRKRPRMTWD-----EAPAEPEAKRAVIKGHGSDGRIL-------SPPLRD-- 52

  Fly   574 DDAEGYYRVRIGEVLDNRYLVNGYTGQGVFSNVVRGRDQARGQANVAIKIIRNNEIMHKTGLREL 638
            ||.:|:|...:.:.|..||.:....|:|.|..|:...|:.. :..|||||||:.:......:.|:
plant    53 DDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDT-KEYVAIKIIRSIKKYRDAAMIEI 116

  Fly   639 EILKKLNDADPEDRFHCLRLYRHFFHKQHLCMVFEPLAMNLREVLKKYGKNVGLHIKAVRSYTQQ 703
            ::|:||..:| :.|..|:::...|.::.|:|:|||.|..:|.:.||: .|.....:..||.:..|
plant   117 DVLQKLVKSD-KGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKR-NKYSAFPLALVRDFGCQ 179

  Fly   704 LFLALKLLKKTGILHADIKPDNILV----------------NENNL-------ILKLCDFGSASA 745
            |..::..:.:..::|.|:||:|||:                ||.:.       .:||.|||  |.
plant   180 LLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNKRSAANETHFRCLPKSSAIKLIDFG--ST 242

  Fly   746 ISDNEITPYLV-SRFYRSPEIILGIPYDYGIDTWSAGCTIYELYTGKILFSGKSNNQMLKFFMDV 809
            :.||.|...:| :|.|||||:|||:.:.|..|.||.||.::||.||:.||....|.:.|......
plant   243 VCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERA 307

  Fly   810 KGKIPNRIIRK-GQFREQHFDQSCNFLYHE---------IDKLTEREKIVVMPVVKPSRSLQQEL 864
            .|.:|..:.|| .:..|::|.:.|...:.|         ..|..:|.|.:|...|..:||     
plant   308 LGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVDNTRS----- 367

  Fly   865 IADQNLPDDQHRKVTQLKDLLENMFALDPAKRISLNQALVHPFIQ 909
                           :..|||..:.|.||::|::.|:||.|||.:
plant   368 ---------------RFADLLYGLLAYDPSERLTANEALDHPFFK 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7028NP_001286884.1 STKc_PRP4 591..908 CDD:271037 105/350 (30%)
S_TKc 599..908 CDD:214567 103/342 (30%)
AME3NP_194992.1 PKc_CLK 58..396 CDD:271036 107/362 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.