DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7028 and clk2a

DIOPT Version :9

Sequence 1:NP_001286884.1 Gene:CG7028 / 38032 FlyBaseID:FBgn0027587 Length:912 Species:Drosophila melanogaster
Sequence 2:NP_001038344.1 Gene:clk2a / 558981 ZFINID:ZDB-GENE-030131-298 Length:526 Species:Danio rerio


Alignment Length:572 Identity:163/572 - (28%)
Similarity:256/572 - (44%) Gaps:98/572 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 SRMQRSHSRSKFESDRRRERERQKDRDRGGGRVGARSGTDNGDRDRYKGSLSEGQN-------KL 422
            ||...|..|:...|.:.|.|||.:|||||......||.|.:...:|.:.:....|:       ..
Zfish     4 SRRYPSSERASRSSYQDRYRERDRDRDRGRKPRHRRSPTYSSSSERERRARGHRQDTGYARSRSY 68

  Fly   423 DKESSDEEVNVNIDILEEDDEERIIELRRKKREELLKKLGTGQESPAPHNSVSYESRSTSQG-SS 486
            |..|||..   ..|....:...|:...|.:.|::       .::...|.|   |.||..|.. ..
Zfish    69 DNRSSDRR---PYDRHYGESYRRLDHSRERDRDQ-------NRDHRTPSN---YYSRDASPSYDF 120

  Fly   487 QRERPLRTPSPTMPCPNPLISEIPKDREDMDNSTSQKTCSAKEKRNEWDMFADQDVDSNFDVSRK 551
            :|.|                   .:||||   |..:|....|.||..                |:
Zfish   121 RRGR-------------------DRDRED---SYRRKGSRRKHKRRR----------------RR 147

  Fly   552 ISPNTIVQNKHQHENPALTDNWDDAEGYYRVRIGEVLDNRYLVNGYTGQGVFSNVVRGRDQARGQ 616
            ....:...::......||... ||.||:...|.|:||..||.:....|:|.|..|::..|..||.
Zfish   148 TRSYSASSSRSDSGTRALCVR-DDEEGHLICRSGDVLQERYEIVSTLGEGTFGRVMQCIDHRRGG 211

  Fly   617 ANVAIKIIRNNEIMHKTGLRELEILKKLNDADPEDRFHCLRLYRHFFHKQHLCMVFEPLAMNLRE 681
            |:||:|||:|.|...:....|:.:|:::|:.|||:...|::::..|.:..|:|:.||.||::..:
Zfish   212 AHVALKIIKNVEKYKEAARLEINVLERINEKDPENNNLCVQMFDWFDYHGHMCISFELLALSTFD 276

  Fly   682 VLKKYGKNVGLHIKAVRSYTQQLFLALKLLKKTGILHADIKPDNIL-VNEN-------------- 731
            .||: ...:...|..||....|:.||:|.|.:..:.|.|:||:||| ||.:              
Zfish   277 FLKE-NNYLPYSINQVRHMAYQVCLAVKFLHENKLTHTDLKPENILFVNSDYTVTYNVEKKRDER 340

  Fly   732 ---NLILKLCDFGSASAISDNEITPYLVS-RFYRSPEIILGIPYDYGIDTWSAGCTIYELYTGKI 792
               |..:::.|||||:  .|:|....:|| |.||:||:||.:.:....|.||.|..::|.|.|..
Zfish   341 TVKNTAVRVVDFGSAT--FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGSILFEYYLGFT 403

  Fly   793 LFSGKSNNQMLKFFMDVKGKIPNRIIRKGQFREQHFDQSCNFLYHEIDKLTEREKIVVMPVVKPS 857
            ||....|.:.|.....:.|.:|:|:|||  .|:|.:     |....:|  .:........|.:..
Zfish   404 LFQTHDNREHLAMMERILGPVPSRMIRK--TRKQKY-----FYRGRLD--WDENSSAGRYVRENC 459

  Fly   858 RSLQQELIADQNLPDDQHRKVTQLKDLLENMFALDPAKRISLNQALVHPFIQ 909
            :.|::.|:::.    ::|.   ||.||:|.|...:|:||::|..||.|||.|
Zfish   460 KPLRRYLLSEA----EEHH---QLFDLIEAMLEYEPSKRLTLAAALRHPFFQ 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7028NP_001286884.1 STKc_PRP4 591..908 CDD:271037 106/335 (32%)
S_TKc 599..908 CDD:214567 104/327 (32%)
clk2aNP_001038344.1 DUF1777 34..>117 CDD:285811 19/95 (20%)
PRP38_assoc <37..104 CDD:289628 13/76 (17%)
PKc_CLK2 174..503 CDD:271117 110/347 (32%)
S_TKc 187..503 CDD:214567 105/334 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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