DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp4k and Cdk5

DIOPT Version :10

Sequence 1:NP_001286884.1 Gene:Prp4k / 38032 FlyBaseID:FBgn0027587 Length:912 Species:Drosophila melanogaster
Sequence 2:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster


Alignment Length:322 Identity:94/322 - (29%)
Similarity:151/322 - (46%) Gaps:54/322 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   599 GQGVFSNVVRGRDQARGQANVAIKIIR---NNEIMHKTGLRELEILKKLNDADPEDRFHCLRLYR 660
            |:|.:..|.:||::...:. ||:|.:|   ::|.:..:.|||:.:||:|...      :.:||..
  Fly    11 GEGTYGTVFKGRNRDTMEI-VALKRVRLDEDDEGVPSSALREICLLKELKHK------NIVRLID 68

  Fly   661 HFFHKQHLCMVFEPLAMNLREVLKKY--GKNVGLHIKAVRSYTQQLFLALKLLKKTGILHADIKP 723
            .....:.|.:|||    :..:.||||  ..|..:.:...||:..||...|.......:||.|:||
  Fly    69 VLHSDKKLTLVFE----HCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKP 129

  Fly   724 DNILVNENNLILKLCDFGSASA--ISDNEITPYLVSRFYRSPEIILGIP-YDYGIDTWSAGCTIY 785
            .|:|:|:|. .|||.|||.|.|  |.....:..:|:.:||.|:::.|.. |...||.|||||.:.
  Fly   130 QNLLINKNG-ELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILA 193

  Fly   786 ELY-TGKILFSGKS-NNQMLKFFMDVKGKIPNRIIRKGQFREQHFDQSCNFLYHEIDKLTEREKI 848
            ||. .|:.||.|.. .:|::|.|. |.| .||             :.|...:.|..|       .
  Fly   194 ELADAGRPLFPGSDVLDQLMKIFR-VLG-TPN-------------EDSWPGVSHLSD-------Y 236

  Fly   849 VVMPVVKPSRSLQQELIADQNLPDDQHRKVTQLKDLLENMFALDPAKRISLNQALVHPFIQE 910
            |.:|.. |:.:...:|:...|         ::.:|||:.:....|.:|||...|:.||:..:
  Fly   237 VALPSF-PAITSWSQLVPRLN---------SKGRDLLQKLLICRPNQRISAEAAMQHPYFTD 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp4kNP_001286884.1 STKc_PRP4 591..908 CDD:271037 94/318 (30%)
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 94/318 (30%)

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