DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7028 and Clk2

DIOPT Version :9

Sequence 1:NP_001286884.1 Gene:CG7028 / 38032 FlyBaseID:FBgn0027587 Length:912 Species:Drosophila melanogaster
Sequence 2:XP_008759408.1 Gene:Clk2 / 365842 RGDID:1359711 Length:540 Species:Rattus norvegicus


Alignment Length:609 Identity:169/609 - (27%)
Similarity:250/609 - (41%) Gaps:160/609 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 RRDHSRDRDRRGLDRPPPPTDMRPGRARERDVRPSRMQRSHSRS-KFESDRRRERERQKD---RD 391
            ||.||.:|..||              :.....|..:.:|..||| ...|||.|.|.|:..   |.
  Rat    38 RRYHSSERGSRG--------------SYHEHYRSRKHKRRRSRSWSSTSDRTRRRRREDSYHVRS 88

  Fly   392 RGGGRVGARSGTDNG------DRDRYKGSLSEGQNKLDKESSDEEVNVNIDILEEDDEERIIELR 450
            |.|..:...|..|:.      || ||.||........|:.          :...:.|.....|..
  Rat    89 RSGYLLSNSSYDDHSSDRRLYDR-RYCGSYRRNDYSRDRG----------EAYYDTDFRHSYEYH 142

  Fly   451 RKKREELLKKLGTGQESPAPHNSVSYESRSTSQGSSQRERPLRTPSPTMPCPNPLISEIPKDRED 515
            |:                   || ||.|:.:|     |.:|.|                      
  Rat   143 RE-------------------NS-SYRSQRSS-----RRKPRR---------------------- 160

  Fly   516 MDNSTSQKTCSAKEKRNEWDMFADQDVDSNFDVSRKISPNTIVQNKHQHENPALTDNWDDAEGYY 580
                                              |:....|...:..||.:.......|||||:.
  Rat   161 ----------------------------------RRRRSRTFSHSSSQHSSRRAKSVEDDAEGHL 191

  Fly   581 RVRIGEVLDNRYLVNGYTGQGVFSNVVRGRDQARGQANVAIKIIRNNEIMHKTGLRELEILKKLN 645
            ...:|:.|..||.:....|:|.|..||:..|..||.|.||:|||:|.|...:....|:.:|:|:|
  Rat   192 IYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKIN 256

  Fly   646 DADPEDRFHCLRLYRHFFHKQHLCMVFEPLAMNLREVLKKYGKNVGLHIKAVRSYTQQLFLALKL 710
            :.||:::..|::::..|.:..|:|:.||.|.::..:.||. ...:...|..||....||..|:|.
  Rat   257 EKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKD-NNYLPYPIHQVRHMAFQLCQAVKF 320

  Fly   711 LKKTGILHADIKPDNIL-VNEN-----NL------------ILKLCDFGSASAISDNEITPYLVS 757
            |....:.|.|:||:||| ||.:     ||            .:::.|||||:  .|:|....:||
  Rat   321 LHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT--FDHEHHSTIVS 383

  Fly   758 -RFYRSPEIILGIPYDYGIDTWSAGCTIYELYTGKILFSGKSNNQMLKFFMDVKGKIPNRIIRKG 821
             |.||:||:||.:.:....|.||.||.|:|.|.|..||....|.:.|.....:.|.:|:|:||| 
  Rat   384 TRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPVPSRMIRK- 447

  Fly   822 QFREQHFDQSCNFLYH---EIDKLTEREKIVVMPVVKPSRSLQQELIADQNLPDDQHRKVTQLKD 883
             .|:|      .:.|.   :.|:.|...: .|....||   |::.|.::   .:|.|    ||.|
  Rat   448 -TRKQ------KYFYRGRLDWDENTSAGR-YVRENCKP---LRRYLTSE---AEDHH----QLFD 494

  Fly   884 LLENMFALDPAKRISLNQALVHPF 907
            |:|||...:||||::|.:||.|||
  Rat   495 LIENMLEYEPAKRLTLGEALQHPF 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7028NP_001286884.1 STKc_PRP4 591..908 CDD:271037 116/339 (34%)
S_TKc 599..908 CDD:214567 114/331 (34%)
Clk2XP_008759408.1 PKc_CLK2 190..519 CDD:271117 118/351 (34%)
S_TKc 203..519 CDD:214567 115/338 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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