DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7028 and clk4a

DIOPT Version :9

Sequence 1:NP_001286884.1 Gene:CG7028 / 38032 FlyBaseID:FBgn0027587 Length:912 Species:Drosophila melanogaster
Sequence 2:XP_003199888.1 Gene:clk4a / 321857 ZFINID:ZDB-GENE-030131-576 Length:496 Species:Danio rerio


Alignment Length:647 Identity:158/647 - (24%)
Similarity:250/647 - (38%) Gaps:187/647 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 RSRDRDRSPPRRRASDQQTQVRPRSRNRNMEDLRQEINRDKQRERRDHSRDRDRRGLDRPPPPTD 351
            |...|:|||..|..|.:...:..|.|:|  .|.......:|.|:...|.::.|...|::      
Zfish     2 RQTQRERSPWLRELSLEDRIMETRKRHR--RDSHSSERENKYRKHHHHYKNSDGHCLEK------ 58

  Fly   352 MRPGRARERDVRPSRMQRSHSRSKFES--------DRRRERERQKDRDRGGGRVGARSGTDNGDR 408
             |....|........:.|.|..:.:.:        ||.|.|||.::|:|              ||
Zfish    59 -RSSNERLDTSEKHAVFRDHEHNGYAACKDKERNRDRSRSRERHRERER--------------DR 108

  Fly   409 DRYKGSLSEGQNKLDKESSDEEVNVNIDILEEDDEERIIELRRKKREELLKKLGTGQESPAPHNS 473
            |.:..|.|.|                                                     ||
Zfish   109 DWHHYSKSSG-----------------------------------------------------NS 120

  Fly   474 VSYESRSTSQGSSQRERPLRTPSPTMPCPNPLISEIPKDREDMDNSTSQKTCSAKEKRNEWDMFA 538
            :        :.|..|.|                   .:.|....:|.|:   |.:.||       
Zfish   121 M--------RSSRHRHR-------------------HRHRRSHPHSDSR---SHRRKR------- 148

  Fly   539 DQDVDSNFDVSRKISPNTIVQNKHQHENPALTDNWDDAEGYYRVRIGEVLDNRYLVNGYTGQGVF 603
                      ||.:.                    ||.||:.....|::|..||.:....|:|.|
Zfish   149 ----------SRSVE--------------------DDEEGHLVYHSGDMLRARYEIVCTLGEGAF 183

  Fly   604 SNVVRGRDQARGQANVAIKIIRNNEIMHKTGLRELEILKKLNDADPEDRFHCLRLYRHFFHKQHL 668
            ..||...|..:..|.:|:|||:|.|......|.|:|:|:::|..|.:.|:.|:|:|..|.|..|:
Zfish   184 GKVVECIDHEKVGARIALKIIKNIERYRDAALSEVEVLEQINSLDCDRRYACVRMYDWFDHHGHI 248

  Fly   669 CMVFEPLAMNLREVLKKYGKNVGLHIKAVRSYTQQLFLALKLLKKTGILHADIKPDNIL-VNE-- 730
            |:.||.|.::..:.||: ......:|..:|....|:..|::.|.|..:.|.|:||:||| ||.  
Zfish   249 CIAFELLGLSTYDFLKE-NNFQPFYINHIRHMAYQIIRAVRFLHKNKLTHTDLKPENILFVNSEY 312

  Fly   731 ---------------NNLILKLCDFGSASAISDNEITPYLVSRFYRSPEIILGIPYDYGIDTWSA 780
                           .|..:|:.|||:|:...::. |..:.:|.||:||:||.:.:.:..|.||.
Zfish   313 NIRYNSKMKRDERTVKNPDVKVVDFGNATYEHEHH-TSVVSTRHYRAPEVILDLGWSHSCDVWSV 376

  Fly   781 GCTIYELYTGKILFSGKSNNQMLKFFMDVKGKIPNRIIRKGQFREQHFDQSCNFLYHEIDKLTER 845
            ||.:.|.|.|..||....:.:.|.....|.|.||..:::|  .|:..|.:: :.|..:|...:.|
Zfish   377 GCILIEYYLGSTLFQTHDSKEHLAMMERVLGPIPTHMLQK--TRKSRFVRN-DKLDWDIHSSSGR 438

  Fly   846 EKIVVMPVVKPSRSLQQELIADQNLPDDQHRKVTQLKDLLENMFALDPAKRISLNQALVHPF 907
            .      |.|..:.|:|.|::..:    .|.   ||.||:|.|...|..|||:|::|:.|||
Zfish   439 Y------VRKQCKPLRQYLVSSSS----DHE---QLFDLIERMLEYDVTKRITLDEAIKHPF 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7028NP_001286884.1 STKc_PRP4 591..908 CDD:271037 105/335 (31%)
S_TKc 599..908 CDD:214567 103/327 (31%)
clk4aXP_003199888.1 PKc_like 159..488 CDD:304357 107/347 (31%)
S_TKc 172..488 CDD:214567 104/334 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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