DRSC/TRiP Functional Genomics Resources

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Protein Alignment NitFhit and yobB

DIOPT Version :10

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_416357.1 Gene:yobB / 948329 ECOCYCID:G7015 Length:218 Species:Escherichia coli


Alignment Length:152 Identity:34/152 - (22%)
Similarity:57/152 - (37%) Gaps:45/152 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 FVVAAAQIGWHNQKRQSWGHSMIVSPWGNVL-ADCSEQELDIGTAEVDLSVLQSLYQTMPCF--- 292
            ||.|||:     |:.|     ::|.|..::| .|.|.:.|   .|..|||:|..|     |:   
E. coli    28 FVRAAAR-----QQCQ-----LLVFPSLSLLGCDYSRRAL---PAPPDLSLLDPL-----CYAAT 74

  Fly   293 ------------EHRRNDIYALTAYNLRSKEP----------TQDRPFATNIVDKRTIFYESE-H 334
                        |:....|..:..:....|.|          ...|.....:||::....:.: .
E. coli    75 TWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPT 139

  Fly   335 CFAFTNLRCVVKGHVLVSTKRV 356
            |..||..:|:.:..:|.|.:|:
E. coli   140 CSLFTTGQCLGEPDLLASARRL 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596 21/79 (27%)
FHIT 317..436 CDD:238606 9/41 (22%)
yobBNP_416357.1 CN_hydrolase 5..211 CDD:425873 34/152 (22%)

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