DRSC/TRiP Functional Genomics Resources

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Protein Alignment NitFhit and NTA1

DIOPT Version :10

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_012596.3 Gene:NTA1 / 853525 SGDID:S000003823 Length:457 Species:Saccharomyces cerevisiae


Alignment Length:220 Identity:43/220 - (19%)
Similarity:81/220 - (36%) Gaps:61/220 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLVNTTRRSIVIAIHQQLRRMSVQKRKDQSATIAVGQMRSTSDKA-ANLSQVIELVDRAKSQN 64
            |||.:..:.:.:||.::.|                 :||:..|..:. :.|.:|.:.....|.. 
Yeast    11 MSTKLLVSLKVLVIQLNPQ-----------------IGQVDQTIKRTWSILDKVTKSATYVKPD- 57

  Fly    65 ACMLFLPE--CCDFVGESRTQTI----ELSEGLDGELMAQYRELAKCNKIWISLGGVHERNDQKI 123
              ::..||  ...:...:|...:    :..||...||.....|..:|..|   :|...:.::||:
Yeast    58 --IILFPEFALTGYSFHARKDILPYVTKKDEGPSFELAKSISEKFQCYTI---IGYPEDDDEQKL 117

  Fly   124 FNAHVLLNEKGELAAVYRKLHMFDVT-------------------TKEVRLRESDTVTPGYCLER 169
            :|:.:::|.:||....|||..::|..                   :|..:|...|:......|:.
Yeast   118 YNSALVVNPQGEQIFNYRKTFLYDTEMNWDCEENPEGFQTFPMDFSKCAKLSNEDSYNRDVTLKA 182

  Fly   170 PVSTPVGQIGLQICYDL---RFAEP 191
            .:.         ||.||   :|..|
Yeast   183 SIG---------ICMDLSPYKFMAP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596 37/187 (20%)
FHIT 317..436 CDD:238606
NTA1NP_012596.3 ScNTA1_like 20..315 CDD:143590 40/211 (19%)
Blue background indicates that the domain is not in the aligned region.

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