DRSC/TRiP Functional Genomics Resources

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Protein Alignment NitFhit and NIT2

DIOPT Version :9

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_012409.1 Gene:NIT2 / 853316 SGDID:S000003662 Length:307 Species:Saccharomyces cerevisiae


Alignment Length:301 Identity:104/301 - (34%)
Similarity:171/301 - (56%) Gaps:37/301 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IAVGQMRSTSDKAANLSQVIELVDRAKSQNACMLFLPECCDFVGESRTQT---IELSEGLDGELM 96
            :||.|:.|::|...||..|.||:..|..:.|.::||||..|::.::...:   .:.|.....:|.
Yeast     8 VAVAQLCSSADLTKNLKVVKELISEAIQKKADVVFLPEASDYLSQNPLHSRYLAQKSPKFIRQLQ 72

  Fly    97 AQYRELAKCN--KIWISLGGVH---------ERNDQKIFNAHVLLNEKGELAAVYRKLHMFDVTT 150
            :...:|.:.|  .|.:|: |||         |.|| ::.|..:.::.:|::...|:|||:|||..
Yeast    73 SSITDLVRDNSRNIDVSI-GVHLPPSEQDLLEGND-RVRNVLLYIDHEGKILQEYQKLHLFDVDV 135

  Fly   151 KE-VRLRESDTVTPGYCLERPVSTPVGQIGLQICYDLRFAEPAVLLRKLGANLLTYPSAFTYATG 214
            .. ..|:||.:|.||..:...:.:|:|::|..||||:||.|.::.||.:||.:|.:|||||..||
Yeast   136 PNGPILKESKSVQPGKAIPDIIESPLGKLGSAICYDIRFPEFSLKLRSMGAEILCFPSAFTIKTG 200

  Fly   215 KAHWEILLRARAIETQCFVVAAAQIGWH------------------NQKRQSWGHSMIVSPWGNV 261
            :||||:|.||||::|||:|:...|:|.|                  :.:|:||||||::.|||.:
Yeast   201 EAHWELLGRARAVDTQCYVLMPGQVGMHDLSDPEWEKQSHMSALEKSSRRESWGHSMVIDPWGKI 265

  Fly   262 L--ADCSEQELDIGTAEVDLSVLQSLYQTMPCFEHRRNDIY 300
            :  ||.|.....:..|::|..:||.:...||.:..||:|::
Yeast   266 IAHADPSTVGPQLILADLDRELLQEIRNKMPLWNQRRDDLF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596 101/295 (34%)
FHIT 317..436 CDD:238606
NIT2NP_012409.1 nit 7..302 CDD:143596 101/295 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345985
Domainoid 1 1.000 166 1.000 Domainoid score I817
eggNOG 1 0.900 - - E1_COG0388
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 177 1.000 Inparanoid score I973
Isobase 1 0.950 - 0 Normalized mean entropy S1193
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004252
OrthoInspector 1 1.000 - - oto99950
orthoMCL 1 0.900 - - OOG6_103694
Panther 1 1.100 - - LDO PTHR23088
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R813
SonicParanoid 1 1.000 - - X3511
TreeFam 1 0.960 - -
1413.730

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