DRSC/TRiP Functional Genomics Resources

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Protein Alignment NitFhit and NIT3

DIOPT Version :9

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_013455.1 Gene:NIT3 / 851065 SGDID:S000004343 Length:291 Species:Saccharomyces cerevisiae


Alignment Length:296 Identity:99/296 - (33%)
Similarity:160/296 - (54%) Gaps:27/296 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MSVQKRKDQSATIAVGQMRSTS-DKAANLSQVIELVDRAKSQ--NACMLFLPECCD--FVGESRT 82
            ||..|...|...:|:.|:..:| ||.|||.:....::||..:  :..::.||||.:  :..:...
Yeast     1 MSASKILSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFR 65

  Fly    83 QTIELSEGLDGELMAQY-RELAKCNKIWISLGGVHERND---QKIFNAHVLLNEKGELAAVYRKL 143
            :..|:....:.....|: ..||...|| |.:||.....|   .||:|..::.||.|:|...:||:
Yeast    66 KYSEVINPKEPSTSVQFLSNLANKFKI-ILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKV 129

  Fly   144 HMFDVTTKE-VRLRESDTVTPGYCLER--PVSTPVGQIGLQICYDLRFAEPAVLLRKLGANLLTY 205
            |:|||.... :...||:|::||   |:  .:.|..|:.|:.||||:||.|.|:|..:.||..:.|
Yeast   130 HLFDVDIPNGISFHESETLSPG---EKSTTIDTKYGKFGVGICYDMRFPELAMLSARKGAFAMIY 191

  Fly   206 PSAFTYATGKAHWEILLRARAIETQCFVVAAA-----QIGWHNQKRQSWGHSMIVSPWGNVLADC 265
            ||||...||..||.:|.|:||::.|.:|:..:     |..:|     ::|||::|.|.|.::|:.
Yeast   192 PSAFNTVTGPLHWHLLARSRAVDNQVYVMLCSPARNLQSSYH-----AYGHSIVVDPRGKIVAEA 251

  Fly   266 SEQELDIGTAEVDLSVLQSLYQTMPCFEHRRNDIYA 301
            .|.| :|..||:|..|::|..|.:|..:.||.|:|:
Yeast   252 GEGE-EIIYAELDPEVIESFRQAVPLTKQRRFDVYS 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596 91/278 (33%)
FHIT 317..436 CDD:238606
NIT3NP_013455.1 nit 12..281 CDD:143596 91/278 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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