DRSC/TRiP Functional Genomics Resources

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Protein Alignment NitFhit and HINT4

DIOPT Version :10

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001319963.1 Gene:HINT4 / 827357 AraportID:AT4G16566 Length:173 Species:Arabidopsis thaliana


Alignment Length:139 Identity:29/139 - (20%)
Similarity:47/139 - (33%) Gaps:53/139 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 KEPTQDRPFATNIVDKRTIFYESEHCFAFTNLRCVVKGHVLVSTKRVTPRLCGL-----DCAEMA 369
            :.||..|           :.:..|...||.:::...:.|.||..|...|.:..|     |.:.:.
plant    15 RNPTTTR-----------LLHTDEKVIAFQDIKPAAQRHYLVIPKEHIPTVNDLQRRDEDYSLVR 68

  Fly   370 DMFTTVCLVQRLLEKIYQTTSATVTVQDGAQA----------GQTVPHVHFH-----IMPR---- 415
            .|.:   :.|:||:|            |..|:          ..:|.|:|.|     .:||    
plant    69 HMLS---VGQQLLQK------------DAPQSIHRFGFHQPPFNSVDHLHLHCFALPYVPRWKAI 118

  Fly   416 ---RLGDFG 421
               .||..|
plant   119 KYKSLGPLG 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596
FHIT 317..436 CDD:238606 26/132 (20%)
HINT4NP_001319963.1 HIT_like 8..108 CDD:469672 24/118 (20%)
Blue background indicates that the domain is not in the aligned region.

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