DRSC/TRiP Functional Genomics Resources

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Protein Alignment NitFhit and NIT3

DIOPT Version :10

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_190018.1 Gene:NIT3 / 823557 AraportID:AT3G44320 Length:346 Species:Arabidopsis thaliana


Alignment Length:374 Identity:87/374 - (23%)
Similarity:153/374 - (40%) Gaps:95/374 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLVNTTRRSIVIAIHQQLRRMSVQKRKDQSATIAVGQMRST---SDKAANLSQVIELVDRAKS 62
            ||::.|||:   ||.:             |.|:|:.|..::|:   :|..|.|.:..:.:..|.|
plant     7 MSSVKNTTQ---VIGV-------------DPSSTVRVTIVQSSTVYNDTPATLDKAEKFIVEAAS 55

  Fly    63 QNACMLFLPECCDFVGE-------SRTQTIELSEGLD-------------GELMAQYRELAKCNK 107
            :.|.::..||.  |:|.       .....:...||.|             |..:.:..|||..|.
plant    56 KGAKLVLFPEA--FIGGYPRGFRFGLAVGVHNEEGRDEFRNYHASAIKVPGPEVERLAELAGKNN 118

  Fly   108 IWISLGGVHERNDQKIFNAHVLLNEKGELAAVYRKLHMFDVTTKEVRLRESDTVT-PGYCLERPV 171
            :.:.:|.: |::...::...:..:.:|:....:||  :...:.:.....:.|..| |.|      
plant   119 VHLVMGAI-EKDGYTLYCTALFFSPQGQFLGKHRK--VMPTSLERCIWGQGDGSTIPVY------ 174

  Fly   172 STPVGQIGLQICYDLRFAEPAVLLRKLGANLLTYPSAFTYATGKAHWEILLRARAIETQCFVVAA 236
            .||:|:||..||::.|.......|...|..:...|:| .|:   ..|:..:...|:|..|||::|
plant   175 DTPIGKIGAAICWENRMPLYRTALYAKGIEIYCAPTA-DYS---LEWQASMIHIAVEGGCFVLSA 235

  Fly   237 AQIGWHNQKRQ----------------------SWGHSMIVSPWGNVLADCSEQELDIGTAEVDL 279
            .|.   .::|:                      |.|.|:|:||.|.|||..:.:...:.||::||
plant   236 HQF---CKRREFPEHPDYLFNDIVDTKEHDPTVSGGGSVIISPLGKVLAGPNYESEGLVTADLDL 297

  Fly   280 SVL--QSLYQTMPCFE----HRRNDIYALTAYNLRSKEPTQDRPFATNI 322
            ..:  ..||     |:    :.:.||:.||. |...|:|.   .|.|.:
plant   298 GDIARAKLY-----FDVVGHYSKPDIFNLTV-NEHPKKPV---TFMTKV 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596 69/313 (22%)
FHIT 317..436 CDD:238606 2/6 (33%)
NIT3NP_190018.1 PLN02504 1..346 CDD:178120 87/374 (23%)

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