DRSC/TRiP Functional Genomics Resources

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Protein Alignment NitFhit and NLP1

DIOPT Version :10

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_850101.1 Gene:NLP1 / 817290 AraportID:AT2G27450 Length:326 Species:Arabidopsis thaliana


Alignment Length:218 Identity:56/218 - (25%)
Similarity:99/218 - (45%) Gaps:18/218 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 MAQYRELAKCNKIWISLGGVHERNDQKIFNAHVLLNEKGELAAVYRKLHMFDVTTKEVRLRESDT 160
            :|:.::|||...:.|.:....|.|... :|:..:::..|....:|||.|:.|    ....:|...
plant   104 IARMQKLAKELGVVIPVSFFEEANTAH-YNSIAIIDADGTDLGIYRKSHIPD----GPGYQEKFY 163

  Fly   161 VTPGYCLERPVSTPVGQIGLQICYDLRFAEPAVLLRKLGANLLTYPSAF------TYATGKAHWE 219
            ..||....:...|...:||:.||:|..|.|.|..:...||.:|.||:|.      .....:.||.
plant   164 FNPGDTGFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDQGLDSRDHWR 228

  Fly   220 ILLRARAIETQCFVVAAAQIG------WHNQKRQS-WGHSMIVSPWGNVLADCSEQELDIGTAEV 277
            .:::..|......:||:.:||      .|...:.: :|.|.|..|.|.::|:..::...:..|:.
plant   229 RVMQGHAGANVVPLVASNRIGKEIIETEHGPSQITFYGTSFIAGPTGEIVAEADDKSEAVLVAQF 293

  Fly   278 DLSVLQSLYQTMPCFEHRRNDIY 300
            ||.:::|..|:...|..||.|:|
plant   294 DLDMIKSKRQSWGVFRDRRPDLY 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596 52/212 (25%)
FHIT 317..436 CDD:238606
NLP1NP_850101.1 PLN02747 4..326 CDD:215398 56/218 (26%)
Blue background indicates that the domain is not in the aligned region.

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