DRSC/TRiP Functional Genomics Resources

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Protein Alignment NitFhit and nit2

DIOPT Version :9

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_991174.3 Gene:nit2 / 402904 ZFINID:ZDB-GENE-050522-65 Length:284 Species:Danio rerio


Alignment Length:272 Identity:97/272 - (35%)
Similarity:150/272 - (55%) Gaps:6/272 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IAVGQMRSTSDKAANLSQVIELVDRAKSQNACMLFLPECCDFVGESRTQTI-ELSEGLDGELMAQ 98
            :||.|:..:..||.||.:...||..|..|.|.::.||||  |.....|... |.:|.:.||....
Zfish    13 LAVVQLHVSKIKADNLGRAQTLVTEAAGQGAKVVVLPEC--FNSPYGTGFFKEYAEKIPGESTQV 75

  Fly    99 YRELAKCNKIWISLGGVHERNDQKIFNAHVLLNEKGELAAVYRKLHMFDVTTK-EVRLRESDTVT 162
            ..|.||...|::..|.:.|.:..|::|...:....|:|...:||:|:||:... ::|.:||:|::
Zfish    76 LSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGKLLVTHRKIHLFDIDVPGKIRFQESETLS 140

  Fly   163 PGYCLERPVSTPVGQIGLQICYDLRFAEPAVLLRKLGANLLTYPSAFTYATGKAHWEILLRARAI 227
            ||..|.. ..||..::|:.||||:||||.|.:..|.|..||.||.||...||.||||:|.|.||:
Zfish   141 PGKSLSM-FETPYCKVGVGICYDIRFAELAQIYAKKGCQLLVYPGAFNMTTGPAHWELLQRGRAV 204

  Fly   228 ETQCFVVAAAQIGWHNQKRQSWGHSMIVSPWGNVLADCSEQELDIGTAEVDLSVLQSLYQTMPCF 292
            :.|.:|..|:..........:||||.:::|||.|::....:| .:..|::||..|..:.|.:|..
Zfish   205 DNQVYVATASPARDETASYVAWGHSSVINPWGEVISKAGSEE-SVVYADIDLQYLADVRQQIPIT 268

  Fly   293 EHRRNDIYALTA 304
            :.||||:|::.:
Zfish   269 KQRRNDLYSVNS 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596 92/262 (35%)
FHIT 317..436 CDD:238606
nit2NP_991174.3 nit 12..272 CDD:143596 92/262 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1154369at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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