DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NitFhit and HINT1

DIOPT Version :9

Sequence 1:NP_525122.1 Gene:NitFhit / 38029 FlyBaseID:FBgn0024945 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001259964.1 Gene:HINT1 / 33471 FlyBaseID:FBgn0031459 Length:150 Species:Drosophila melanogaster


Alignment Length:92 Identity:26/92 - (28%)
Similarity:40/92 - (43%) Gaps:10/92 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 YESEHCFAFTNLRCVVKGHVLVSTKRVTPR--LCGLDCAE--MADMFTTVCLVQRLLEK-IYQTT 389
            :|.:.|.||.::......|.|     |.||  :..|..||  .||:...:.||.|.:.| :....
  Fly    57 HEDDKCVAFHDVAPQAPTHFL-----VIPRKPIAQLSLAEDGDADLLGHLMLVGRKVAKELGLAD 116

  Fly   390 SATVTVQDGAQAGQTVPHVHFHIMPRR 416
            ...|.:.:|....|:|.|:|.|.:..|
  Fly   117 GYRVVINNGKHGAQSVYHLHLHFLGGR 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NitFhitNP_525122.1 nit 34..296 CDD:143596
FHIT 317..436 CDD:238606 26/92 (28%)
HINT1NP_001259964.1 PKCI_related 40..142 CDD:238607 25/89 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0537
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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