DRSC/TRiP Functional Genomics Resources

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Protein Alignment mri and kctd4

DIOPT Version :9

Sequence 1:NP_612008.1 Gene:mri / 38028 FlyBaseID:FBgn0035107 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001002224.1 Gene:kctd4 / 792402 ZFINID:ZDB-GENE-040704-71 Length:258 Species:Danio rerio


Alignment Length:322 Identity:69/322 - (21%)
Similarity:106/322 - (32%) Gaps:113/322 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RRILKERSRLNRPQHNMSGGGAVPKHDIKSPCGASPSCQATGSGMGRLPLPPERITMLVDGVRFT 108
            ||:..|..::|              .|:..|   |.|.:...||         .||:.|.|..:.
Zfish     6 RRMESELRQIN--------------PDLLQP---SKSFKKPSSG---------TITINVGGYLYA 44

  Fly   109 VEQSLLTAHPTTMLGTMFGSGFQFAHTNERGEYDV-ADGISHLVFRAILEYYKSGVIRCPPTVSV 172
            .::..|..||.::|..|........|.:..|...: .||   .:||.||.:.:.|.:..|.....
Zfish    45 AQRHTLAKHPGSLLEEMVTGKKPVLHVDSMGNTFIDRDG---PIFRHILNFLRLGELVLPEDFKE 106

  Fly   173 PEL--KEACDYLLIPFDATTVRCQNLRGLLHELSNEGARQQFELFLEDLILPLMVASAQRGDREC 235
            .||  :||..|          |...|...|.:...:.|.|:...|||       |..:....:..
Zfish   107 TELLRREANFY----------RLSELAQALQDWEQQQATQREPAFLE-------VTDSHERSQGL 154

  Fly   236 HVVVLLEDDMVEWDEEFPPQMGEEYCQTVHSTAMHRFFKYIENRDVAKQVMKDRGLKKIRCGIEG 300
            .|                      ||..      :.|.:.::||.|  |:.|.|        ::|
Zfish   155 RV----------------------YCSD------NTFIEKVKNRLV--QISKSR--------LDG 181

  Fly   301 YPTHKEKIRRRPGGRAEVIYSYVQ-RPFIHMSWEKEEAKSRHV---------DFQCVKSKSV 352
            :|.           ..||..:.:| |.||     |.|..||.|         ..:|:|.::|
Zfish   182 FPE-----------EFEVSSNIIQFRHFI-----KSEQGSRLVLKQDSTFLCTLECLKLETV 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mriNP_612008.1 BTB 98..199 CDD:197585 26/103 (25%)
BTB_3 128..357 CDD:292636 50/238 (21%)
kctd4NP_001002224.1 BTB 34..133 CDD:197585 27/111 (24%)
BTB 34..123 CDD:295341 25/101 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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