DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mri and kctd20

DIOPT Version :9

Sequence 1:NP_612008.1 Gene:mri / 38028 FlyBaseID:FBgn0035107 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_009294052.1 Gene:kctd20 / 570693 ZFINID:ZDB-GENE-100408-1 Length:332 Species:Danio rerio


Alignment Length:297 Identity:173/297 - (58%)
Similarity:224/297 - (75%) Gaps:13/297 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PLPPERITMLVDGVRFTVEQSLLTAHPTTMLGTMFGSGFQ--FAHTNERGEYDVADGISHLVFRA 154
            ||..:|:|::|||..|.|:.::.||:|.|:||.|||...|  |...|.:|||::|:||...:||.
Zfish    32 PLSHDRVTLVVDGTHFVVDPAVFTAYPDTVLGRMFGRARQHSFTRPNTKGEYEIAEGIGASIFRI 96

  Fly   155 ILEYYKSGVIRCPPTVSVPELKEACDYLLIPFDATTVRCQNLRGLLHELSNEGARQQFELFLEDL 219
            ||::|:.|::.||..||:.||:||||||.|.||..||||::|..|||||||:|||:|||:|||:|
Zfish    97 ILDFYRVGILHCPEGVSLAELREACDYLCINFDYNTVRCRDLSALLHELSNDGARRQFEVFLEEL 161

  Fly   220 ILPLMVASAQRGDRECHVVVLLEDDMVEWDEEFPPQMGEEYCQTVHSTAMHRFFKYIENRDVAKQ 284
            :||.||:|||.|:||||:|||.:||.|:||.:.||.||||:.|.::||.::||||:||||||||.
Zfish   162 LLPAMVSSAQEGERECHIVVLTDDDTVDWDHDNPPPMGEEHSQIIYSTKLYRFFKFIENRDVAKA 226

  Fly   285 VMKDRGLKKIRCGIEGYPTHKEKIRRRPGGRAEVIYSYVQRPFIHMSWEKEEAKSRHVDFQCVKS 349
            .:|:||||.||.|||||||.|||::|||||::||||||:|||||.:||||||.||||||||||:|
Zfish   227 HLKERGLKNIRIGIEGYPTCKEKVKRRPGGKSEVIYSYLQRPFIQLSWEKEEGKSRHVDFQCVRS 291

  Fly   350 KSVTNLAEANADPPL-----------ELDASGNPIPP 375
            :||.||..|..:.|.           |||....|.||
Zfish   292 RSVPNLITAMGEGPTRAGATPTPQVDELDRLNGPAPP 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mriNP_612008.1 BTB 98..199 CDD:197585 50/102 (49%)
BTB_3 128..357 CDD:292636 147/230 (64%)
kctd20XP_009294052.1 BTB_3 37..142 CDD:318274 51/104 (49%)
PH-like 199..>238 CDD:327399 24/38 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574850
Domainoid 1 1.000 138 1.000 Domainoid score I4785
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 415 1.000 Inparanoid score I1799
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D191593at33208
OrthoFinder 1 1.000 - - FOG0003068
OrthoInspector 1 1.000 - - otm24993
orthoMCL 1 0.900 - - OOG6_105618
Panther 1 1.100 - - LDO PTHR21637
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2047
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

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