DRSC/TRiP Functional Genomics Resources

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Protein Alignment mri and F22E5.8

DIOPT Version :9

Sequence 1:NP_612008.1 Gene:mri / 38028 FlyBaseID:FBgn0035107 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001364741.1 Gene:F22E5.8 / 173610 WormBaseID:WBGene00017707 Length:232 Species:Caenorhabditis elegans


Alignment Length:250 Identity:48/250 - (19%)
Similarity:83/250 - (33%) Gaps:78/250 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ERITMLVDGVRFTVEQSLLTAHPTTMLGTMFGS--GFQFAHTNERGEYDVADGISHLVFRAILEY 158
            |.:.:.|.|..|...:|.||.. ...|..|..|  |.:.   :|.|...:.....|  |..||.:
 Worm     3 ETVQLDVGGTIFKTSKSTLTKF-NGFLKIMLESDIGLKI---DESGSIFIDRSPKH--FDLILNF 61

  Fly   159 YKSGVI---RCPPTVS----------VPELKEACDYLLIPFDATTVRCQNLRGLLHELSNEGARQ 210
            .:.|.:   .|..||.          :.||.|.|...:.|..|..::.:                
 Worm    62 MRDGDVVLPSCELTVKELLAEAQFYLLDELIELCSLKIEPVQAPKIKLR---------------- 110

  Fly   211 QFELFLEDLILPLMVASAQRGDRECHVVVLLEDDMVEWDEEFPPQMGEEYCQTVHSTAM---HRF 272
                |:|:....|.:.:||:                      .|.:..|||...:..::   ...
 Worm   111 ----FIENDSQLLQILAAQQ----------------------KPMLIIEYCMVGNDMSIPYNFNL 149

  Fly   273 FKYIENR----DV-AKQVMKDRGLKKIRCGIEGYPTHK-------EKIRRRPGGR 315
            :::||.:    |: .:::.:|....|.:..|:..||..       ..:|...|||
 Worm   150 YEFIEKQSHQFDIYFQRLSEDESSHKWKARIKWKPTENGYYSQFPYNLRINRGGR 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mriNP_612008.1 BTB 98..199 CDD:197585 26/115 (23%)
BTB_3 128..357 CDD:292636 38/217 (18%)
F22E5.8NP_001364741.1 BTB_2 5..95 CDD:396684 23/95 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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