DRSC/TRiP Functional Genomics Resources

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Protein Alignment rno and AT1G76380

DIOPT Version :9

Sequence 1:NP_001246528.1 Gene:rno / 38027 FlyBaseID:FBgn0035106 Length:3241 Species:Drosophila melanogaster
Sequence 2:NP_974153.1 Gene:AT1G76380 / 843970 AraportID:AT1G76380 Length:580 Species:Arabidopsis thaliana


Alignment Length:656 Identity:130/656 - (19%)
Similarity:226/656 - (34%) Gaps:179/656 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   866 GSSSAGSGVSKRKSSSGSPLKKQSYARSVEQRQKQRQR---RQNEAVAGASATYP------DSRS 921
            |..:..:.:.||| ..|.|.......|:::|:|..::|   .:||....:|:..|      :.|.
plant     2 GEVADNNTLMKRK-KKGRPSLLDLQKRALKQQQLLQRRNPNEENEEELRSSSRNPNFSNRSNRRR 65

  Fly   922 ASSSSDGEDERCRNRQEPERGARRGPIQSKSVPNRSQASRSKPTTEADVGE-GTGASARRKLSTT 985
            .|:|.|.:|||...:.....|.            .|...|....:::..|: .:.|..|||:..:
plant    66 NSNSEDDDDERRDKKHRLLHGL------------NSHEGRDSSNSKSGGGDLDSDARNRRKIDGS 118

  Fly   986 TRGLAQMDKDADESVSSDESEELLPLRGER---------QRESTTTSGLATTGSAIGRNLGQHIY 1041
            .....:..|..|..:......|..||..::         |::.|                 ..:|
plant   119 DNTGEKASKATDILLQRGSLVESTPLPDKKLLFFILDRVQKKDT-----------------YGVY 166

  Fly  1042 SDSESSSSEQEKDQEEQATVESNVSDSQNQQTIRTKAAMKEFVPGTAATTSSTSQAASSTSKAKN 1106
            ||        ..|.||.......:.:..:..|:|     |:...|...|.....|......    
plant   167 SD--------PADPEELPDYYEIIKNPMDFTTLR-----KKLESGAYTTLEQFEQDVFLIC---- 214

  Fly  1107 TREGKEGAASIGNSTKTKPNPNAKLY-PADLLVVPQRQA----AKKASENMRSTN-----LATTL 1161
                                .||..| .||.:...|.:|    |||...|:|..:     ::.:.
plant   215 --------------------TNAMEYNSADTVYYRQARAMLELAKKDFGNLRQESDGEEPVSLSQ 259

  Fly  1162 QPDVSDRVREPDINSISGTAKSKVKDSSSRVSNEA-------DKS------SLEKVRPK---EHL 1210
            ||.|..|.|.|.........:|.:..::|.:|.:|       |.|      :|.|..|.   .|.
plant   260 QPKVVKRGRPPGSGLKKQLEQSLIDRTTSDISADAAAFTYAGDSSRLSGSYNLRKNPPSYGFRHA 324

  Fly  1211 QKTVGKTSESAPAERG-----KRGRPPKVPKDARP---PSITENDKPALPTHTQSKPPSVV---- 1263
            :.:| :.:.::..:.|     ::..||.|.|....   .::.||.:.....::.|...|.:    
plant   325 ETSV-RINHNSENQSGLLIDWEKEFPPSVVKAVNKYGMKNVDENRRDTYNQNSASLQDSSIFTLL 388

  Fly  1264 ------ATPVSAKSNFAVSLVPQRQAAKKAAEQLKSSKPVLESFSTGNDISDKETVTSATISGSG 1322
                  .|||..|:.:..:    |..|:.||    :..||..:|:   ::..::.:.:.|..|.|
plant   389 DDNLKQLTPVGLKAEYGYA----RSLARYAA----NIGPVAWTFA---NVRIEKLLPTGTEFGPG 442

  Fly  1323 SSVPAASTPVKPTRRSSIKEAPITPKEPLSGRRKSKEDLLATPIKTTPLVKRRVVVPNLSSSSS- 1386
            .   ....|..|.::.::          :||::|...|..:.....:    .|::.|:.|.||| 
plant   443 W---VGENPENPPQQQNL----------MSGKQKCSNDYASDDHHQS----SRIMSPSTSVSSSI 490

  Fly  1387 -GDSESSSSSSSS---------------GSSSSSGGSDSDSE---SQASNSENPSSREPPVAPAK 1432
             |:..||..|..|               |||..:...:...|   ||..|.:....|.||...|:
plant   491 IGNIHSSHESKESVQVLNQETEINGLVRGSSGFNHKPNQMLETAGSQQGNIKQEFQRLPPDLNAR 555

  Fly  1433 VPSDSS 1438
            :.|.:|
plant   556 LSSPNS 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnoNP_001246528.1 COG5141 250..>664 CDD:227470
EPL1 <250..288 CDD:287484
PHD_JADE 314..359 CDD:277048
ePHD_RNO 367..480 CDD:277177
TFIIA 2138..>2295 CDD:281188
AT1G76380NP_974153.1 Bromodomain 146..242 CDD:99922 24/149 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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