DRSC/TRiP Functional Genomics Resources

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Protein Alignment rno and ATX1

DIOPT Version :10

Sequence 1:NP_612007.2 Gene:rno / 38027 FlyBaseID:FBgn0035106 Length:3241 Species:Drosophila melanogaster
Sequence 2:NP_850170.1 Gene:ATX1 / 817721 AraportID:AT2G31650 Length:1062 Species:Arabidopsis thaliana


Alignment Length:563 Identity:131/563 - (23%)
Similarity:212/563 - (37%) Gaps:157/563 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 WQARSVADIKMSSIYNRSSTEAPAELYRKDLISAMKLPDSEPLANYEYLIVTDPWKQE------- 181
            |.....|..|.:|:.:.|:    :.||:.::     |.|:|...:..:::..|..:|.       
plant   471 WPEGYTAMRKFTSLTDHSA----SALYKMEV-----LRDAETKTHPLFIVTADSGEQFKGPTPSA 526

  Fly   182 -WEK---GVQVPVNPDSLPEPCVYVLPEPVVSPAHD-FKLPKNRYLRITKDEHYS-PDLHYLTNV 240
             |.|   .::...|.|| |.    :|.|.:.....| |.|.....:::.:|...| |..|     
plant   527 CWNKIYNRIKKVQNSDS-PN----ILGEELNGSGTDMFGLSNPEVIKLVQDLSKSRPSSH----- 581

  Fly   241 VALAENTCAYDIDPIDEAWLRLYNSDRAQCGAFPINATQFERVIEELEVRCWEQIQVILKLEEGL 305
            |::.:|:              |........|..|:...             |:.:..        
plant   582 VSMCKNS--------------LGRHQNQPTGYRPVRVD-------------WKDLDK-------- 611

  Fly   306 GIEFDENVICDVCRSPDSEEANEMVFCDNCNICVHQACYG-ITAIPSGQWLCRTCSMG---IKPD 366
                     |:||...:..|.|..:.||.|.:.||..||| :.......|||..|..|   :.|.
plant   612 ---------CNVCHMDEEYENNLFLQCDKCRMMVHAKCYGELEPCDGALWLCNLCRPGAPDMPPR 667

  Fly   367 CVLCPNKGGAMKSNKSGKHWAHVSCALWIPEVSIGCVDRMEPITKISSIPQSRWSLICVLCRKRV 431
            |.|||..|||||....|: |||::||:||||..:..|.:||||..::.:.:.||.|:|.:|....
plant   668 CCLCPVVGGAMKPTTDGR-WAHLACAIWIPETCLSDVKKMEPIDGVNKVSKDRWKLMCTICGVSY 731

  Fly   432 GSCIQCSVKPCKTAYHVTCAFQHG----LEMRAIIEEGNAEDGVKLRSYCQKHSMSKGKKENAGS 492
            |:|||||...|:.|||..||...|    ||....:|...|:..:::.|:|::|      ::.:.:
plant   732 GACIQCSNNSCRVAYHPLCARAAGLCVELENDMSVEGEEADQCIRMLSFCKRH------RQTSTA 790

  Fly   493 HGGGSASVASAMQKANRY---GSGAGGGADDGNNACGTTGEDPRRRKNHRKTELTSEER----NQ 550
            ..|....:.||..|.:.|   .:.:|....:..|..|..|     ||........|.:|    ||
plant   791 CLGSEDRIKSATHKTSEYLPPPNPSGCARTEPYNCFGRRG-----RKEPEALAAASSKRLFVENQ 850

  Fly   551 ---------------------------------ARAQRLQEVEAEFDKHVNFNDISCHLFDVDDD 582
                                             :.|::.:.:...:.|.:.|.....|.|.:   
plant   851 PYVIGGYSRLEFSTYKSIHGSKVSQMNTPSNILSMAEKYRYMRETYRKRLAFGKSGIHGFGI--- 912

  Fly   583 AIVAIYNYWKLKRKS-----RHNRELIPPKSEDVEMIARKQEQ 620
                   :.||..::     .:..||:.|.      ||.|:||
plant   913 -------FAKLPHRAGDMMIEYTGELVRPS------IADKREQ 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnoNP_612007.2 COG5141 250..>664 CDD:227470 102/424 (24%)
ePHD_RNO 367..480 CDD:277177 48/116 (41%)
PHA03247 <1222..1481 CDD:223021
Chi1 2171..>2348 CDD:442692
ATX1NP_850170.1 Tudor_Agenet_AtEML-like 207..257 CDD:410475
PWWP_AtATX1-like 300..396 CDD:438970
FYRN 447..497 CDD:461787 7/29 (24%)
FYRC 508..597 CDD:470645 20/112 (18%)
PHD_ATX1_2_like 611..657 CDD:276969 16/62 (26%)
ePHD_ATX1_2_like 668..784 CDD:277132 48/116 (41%)
SET_SETD1-like 885..1034 CDD:380916 15/74 (20%)
Blue background indicates that the domain is not in the aligned region.

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