Protein Alignment rno and kdm4b

DIOPT Version :9

• Sequence 1: NP_001246528.1
• Gene: rno / 38027
• FlyBaseID: FBgn0035106
• Length: 3241
• Species: Drosophila melanogaster
• Sequence 2: NP_989064.2
• Gene: kdm4b / 394661
• XenbaseID: XB-GENE-1012886
• Length: 1025
• Species: Xenopus tropicalis
• Alignment Length: 593
• Identity: 135/593 - (22%)
• Similarity: 207/593 - (34%)
• Gaps: 175/593 - (29%)

  Fly     6 KRGNQQHHQSHHPPPQQHQRKDVEPQPPPTKRRKGRPPNGATTAAVAEVTGSGPATGSERVPVLP 70
            :|.||...::.|.|    .||..:|:...|:.:|          .:.||..|....||:.|.|..
 Frog   359 ERRNQLKGKTDHRP----YRKRTQPRRHKTQDQK----------FLQEVLDSNLMLGSQDVDVKK 409

  Fly    71 --------------LCKSKHEEPGAEAGGGGQGRAAAGATSTSKSKSTKLAKSASKCKS------ 115
                          |...||...||:.  ....|..||..|.....:..|..:..:..|
 Frog   410 CEEDEDISKKYEGHLIDMKHNPCGAKL--KNVRRRKAGKNSGILPLTAGLLLNPPELDSIVSFIR 472

  Fly   116 --QGASSSSSWQARSV--------ADIKM---------------------------SSIYNRSST 143
              |..|..|.::.|.:        .|.|:                           .||......
 Frog   473 GPQDLSDESDFKPRPIIPTLYVVPQDNKVVFDKAQMSCQEAFEQFARQGTHSGKAEESIDRPKEA 537

  Fly   144 EAPAELYRKDLISAMKLPDSEPLANYEYLIVTDPWKQEWEKGVQVPVNPDSLPEPCVYVLPEPVV 208
            :||....:.::..:.:.|...|.|.....:|    ||:...      :.||.|    :...|.|.
 Frog   538 QAPVLFPKMEIKKSRRHPLGIPPARLPMSVV----KQDMSS------DDDSTP----FSGEEDVS 588

  Fly   209 SP-------AHDFKLPKNRYLRITKDEHYSPDLHYLTNVVALAENTCA-------YDIDPIDEAW 259
            .|       :|.:|...:.:|...|          .....||.|..||       |..:....:.
 Frog   589 DPEALRTLLSHLWKNKPHNFLAERK----------FNAAAALIEPYCAVCSIFFPYQKESACLSE 643

  Fly   260 LRLYNSDRAQCGAFPINATQFERVIEELEVRCW-------EQIQV-ILKLEEGLGIEFDENVICD 316
            ..:.:|.:.|         :.:.:|.|:   |:       :.:.| ...||:|..|
 Frog   644 YMIPSSKKGQ---------KTKALIPEM---CFAASGGNTDPLPVSTYTLEDGTSI--------- 687

  Fly   317 VCRSPDSEEANEMVFCDNCNICVHQACYGITA-IPSGQWLCRTC-SMGIKPDCVLCPNKGGAMKS 379
                        ::.|..|.:.||.:|||:.. :....|.|..| :.....||.||..:|||:..
 Frog   688 ------------LLSCAKCCLQVHASCYGVNPDLVEDNWTCSRCTACAWNADCCLCNLRGGALHI 740

  Fly   380 NKSGKHWAHVSCALWIPEVS-IGCVDRMEPITKISSIPQSRWSLICVLC----RKRVGSCIQCSV 439
            . :.|.|.|:.||:.:||.. |..|:| .|: .:.:||:.|..|.||.|    ||.||:|:||||
 Frog   741 T-TDKRWVHIVCAVVVPEARFINPVER-HPV-DVRTIPEQRCKLKCVYCRRKIRKEVGACVQCSV 802

  Fly   440 KPCKTAYHVTCAFQHGLEMRAIIEEGNAEDGVKLRSY-CQKHSMSKGKKENAGSHGGGSASVASA 503
            ..|.|::|||||:..|:.|       ..:|...:.|. |.||..|     |..|......|:...
 Frog   803 DRCSTSFHVTCAYTAGITM-------EPDDWPYVVSITCFKHGAS-----NQSSSFSREVSIGQT 855

  Fly   504 MQKANRYG 511
            :...||.|
 Frog   856 VISRNRNG 863

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rno	NP_001246528.1	COG5141	250..>664	CDD:227470	76/278 (27%)
		EPL1	<250..288	CDD:287484	5/37 (14%)
		PHD_JADE	314..359	CDD:277048	9/45 (20%)
		ePHD_RNO	367..480	CDD:277177	45/118 (38%)
		TFIIA	2138..>2295	CDD:281188
kdm4b	NP_989064.2	JmjN	14..55	CDD:128818
		JmjC	175..291	CDD:396791
		PHD_JMJD2B	624..719	CDD:277051	22/127 (17%)
		ePHD_JMJD2B	728..837	CDD:277184	45/118 (38%)
		Tudor_JMJD2B_rpt1	850..903	CDD:410535	4/14 (29%)
		Tudor_JMJD2B_rpt2	907..962	CDD:410538

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910