DRSC/TRiP Functional Genomics Resources

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Protein Alignment rno and Mllt10

DIOPT Version :9

Sequence 1:NP_001246528.1 Gene:rno / 38027 FlyBaseID:FBgn0035106 Length:3241 Species:Drosophila melanogaster
Sequence 2:XP_006497436.2 Gene:Mllt10 / 17354 MGIID:1329038 Length:1101 Species:Mus musculus


Alignment Length:1349 Identity:297/1349 - (22%)
Similarity:466/1349 - (34%) Gaps:446/1349 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 CDVCRSPDSEEANEMVFCD--NCNICVHQACYGITAIPSGQWLCRTC---SMGIKPDCVLCPNKG 374
            |.||........|.:|:||  .|::.||||||||..:|:|.|.||.|   ....:..|.|||:|.
Mouse    25 CCVCSDERGWAENPLVYCDGHGCSVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKD 89

  Fly   375 GAMKSNKSGKHWAHVSCALWIPEVSIGCVDRMEPITKISSIPQSRWSLICVLC-------RKRVG 432
            ||:|...:| .||||.|||:||||....|..||||. :.|:|..|::..|.:|       :...|
Mouse    90 GALKRTDNG-GWAHVVCALYIPEVQFANVSTMEPIV-LQSVPHDRYNKTCYICDEQGRESKAATG 152

  Fly   433 SCIQCSVKPCKTAYHVTCAFQHGLEMRAIIEEGNAEDGVKLRSYCQKHSMSKGKKENAGSHGGGS 497
            :|:.|:...|:.|:|||||...||...   ||||..|.|:...||:.| .||.||...||:....
Mouse   153 ACMTCNKHGCRQAFHVTCAQFAGLLCE---EEGNGADNVQYCGYCKYH-FSKLKKSKRGSNRSYE 213

  Fly   498 ASVASAMQKANRYGSGAGGGADDGNNACGTTGEDPRRRKNHRKTELTSEERNQARAQRLQEVEAE 562
            .|::.:...:                          :.|:|.|.:...:|:              
Mouse   214 QSLSDSSSHS--------------------------QDKHHEKEKKKYKEK-------------- 238

  Fly   563 FDKHVNFNDISCHLFDVDDDAIVAIYNYWKLKRKSRHNRELIPPKSEDVEMIARKQEQQDMENHK 627
             |||                             |.:|.::..|..:                   
Mouse   239 -DKH-----------------------------KQKHKKQPEPSPA------------------- 254

  Fly   628 LVVHLRQDLERVRNLCYMVSRREKLSRSLFKLREQVFYKQLGVLDEMRLEKQQTKQEQQQPVMDL 692
            ||..|....|:.    |..:....:|.||                 .|||....:          
Mouse   255 LVPSLTVTTEKT----YTSTSNNSISGSL-----------------KRLEDTAAR---------- 288

  Fly   693 NAVIYANDGPTLYDRFYSSVGGQTVPAQYQDLKYILEQLMGKLQSGKQGRGRASQSPNKRKQPAK 757
                            :::...|.|.|.....|.:.|      ..|.:|:|:.|.:.:..::..|
Mouse   289 ----------------FTNANFQEVSAHTSSGKDVSE------ARGSEGKGKKSSAHSSGQRGRK 331

  Fly   758 ASPNKKLNNGILSSRTSS-PEKTVAGSKVGTTTSKVRSPPGKNPTGRRASKSSAAAATSTHNKSQ 821
              |....|.|...|.:|. |:    ||..||        ||.      ...||.::..|..:...
Mouse   332 --PGAGRNPGTAVSASSPFPQ----GSFSGT--------PGS------VKSSSGSSVQSPQDFLS 376

  Fly   822 F-HSNIRSSTTSH----SSSGTISSGNSSSANGTSSSDSS---------------SGSDSGSESG 866
            | .|::||.:.:|    ||:..:..|.|.|.....:|.||               |..:|..|.|
Mouse   377 FTDSDLRSDSYTHTQQPSSTKDVHKGESGSQEAAVNSFSSLVGHPVTSTVISQPKSFDNSPGELG 441

  Fly   867 SSSAGSGVSKRKSSSGSPLKKQSYARSVEQRQKQRQRRQNEAVAGASATYPDSRSASSSSDGEDE 931
            |||..:...||..:||..          |:..|:::|:.|:                        
Mouse   442 SSSLPTAGYKRAQTSGIE----------EEAVKEKKRKGNK------------------------ 472

  Fly   932 RCRNRQEPERGARRGPIQSKSVPNRSQASRSKPTTEADVGEGTGASARRKLSTTTR-GLAQMDKD 995
              :::..|  |..:|....::|.:.|.:|.|..::.|.......:|:.:|..|..| |..|....
Mouse   473 --QSKHGP--GRPKGNKNQENVSHLSVSSASPTSSVASAAGSVTSSSLQKSPTLLRNGSLQSLSV 533

  Fly   996 ADESVSSDESEELLPLRGERQRESTTTSGLATTGSAIGRNLGQ---------HIYSDSESSSSEQ 1051
            ....|.|:.|   :..|.:....:||.|.|.   :||...:..         ::.|.|.||:...
Mouse   534 GSSPVGSEIS---MQYRHDGACPTTTFSELL---NAIHNGIYNSNDVAVSFPNVVSGSGSSTPVS 592

  Fly  1052 EKDQEEQATVESNVSDSQNQQTIRTKAAMKEFVPGTAATTSSTSQAASSTSKAKNTREGKEGAAS 1116
            .....:|       |....||......:....|...||||.:.:.:.||.|:|.....|      
Mouse   593 SSHIPQQ-------SSGHLQQVGALSPSAASSVTPAAATTQANTVSGSSLSQAPAHMYG------ 644

  Fly  1117 IGNSTKTKPNPNAKLYPADLLVVPQRQAAKKASENMRSTNLATTLQPDVSDRVREPDINSISGTA 1181
                  ::.|.|    |:..:::.|.::::              ...|:.|..|     |:.|..
Mouse   645 ------SRLNQN----PSMAVLIAQSESSQ--------------TDQDLGDNAR-----SLGGRG 680

  Fly  1182 KSKVKDSSSR--VSN------EADKSSLEKVRPK----EHLQKTVGKTSESAPAERGKRGRPPKV 1234
            .|.....|.|  |||      :...||||.|.|.    |.|.:......:....|:|..|....:
Mouse   681 SSPRGSLSPRSPVSNLQLRYDQPSNSSLETVPPVAASIEQLLERQWSEGQQFLLEQGTPGDILGM 745

  Fly  1235 PKDARP---------------------------------PSITENDKPALPTHT---QSKPPSVV 1263
            .|....                                 |:||.|..|:...||   |:.||   
Mouse   746 LKSLHQLQVENRRLEEQIKNLTAKKERLQLLNAQLSVPFPAITTNPSPSHQMHTYTAQTAPP--- 807

  Fly  1264 ATPVSAKS----NFAVSLVPQRQAAKKAAEQLKSSKPVLESFSTGNDISDKETVTSATISGSGSS 1324
              |.|..|    :...|.:|.            :|.|||           .:.:||:..|.|.||
Mouse   808 --PDSLNSSKSPHIGNSFLPD------------NSLPVL-----------NQDLTSSGQSTSSSS 847

  Fly  1325 VPAASTP----VKPTRRSS----IKEA-PITPKEPLSGRRKSKEDLLATPIKTTPLVKRRVVVPN 1380
              |.|||    ..|.::||    :::. .:|.....||        :.|...|.|.|        
Mouse   848 --ALSTPPPAGQSPAQQSSGVSGVQQVNGVTVGALASG--------MQTVTSTIPAV-------- 894

  Fly  1381 LSSSSSGDSESSSSSSSSGSSSSSGGSDSDSESQASNSENPSSREPPVAPAKVPSDSSLVPKRSP 1445
               |:.|....:...:....:...|..:...::..:.|:||:    |:....||          |
Mouse   895 ---SAVGGIIGALPGNQLAINGIVGALNGVIQTPVTISQNPA----PLTHTSVP----------P 942

  Fly  1446 RKSMDKP-SALTIAPASVNVLNIPSTRSRQNSTTKSTKVALQKAVQSVEDDVKCTPKTNRL---- 1505
            ..:...| :|||.:.:.:.:|   |.:.||       ....|:..|.:.:..:.||:.::.    
Mouse   943 NAAHPMPAAALTNSASGLGLL---SDQQRQ-------MFIQQQQFQQLLNSQQLTPEQHQAFLYQ 997

  Fly  1506 ----QGSMDECGKQVQLEQATK----RATRGSKSRPPSPTAKSSPEKTV 1546
                |....|. :|:||...|:    ....|::: ||..||.::|..|:
Mouse   998 LMQQQHHPPEL-QQLQLPGPTQIPINNLLAGAQA-PPLHTATTNPFLTI 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnoNP_001246528.1 COG5141 250..>664 CDD:227470 98/360 (27%)
EPL1 <250..288 CDD:287484
PHD_JADE 314..359 CDD:277048 21/45 (47%)
ePHD_RNO 367..480 CDD:277177 50/119 (42%)
TFIIA 2138..>2295 CDD:281188
Mllt10XP_006497436.2 PHD_AF10_AF17 24..71 CDD:277049 21/45 (47%)
ePHD_AF10 78..206 CDD:277178 55/133 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1726
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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