DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mtch and Mtch1

DIOPT Version :9

Sequence 1:NP_001246525.1 Gene:Mtch / 38026 FlyBaseID:FBgn0027786 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001094303.1 Gene:Mtch1 / 294313 RGDID:1309262 Length:389 Species:Rattus norvegicus


Alignment Length:325 Identity:115/325 - (35%)
Similarity:176/325 - (54%) Gaps:36/325 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AGFPEHARAEDTEVNVWIRFGLRLGVSAALHPFEYSKTLIQLGYEPIAPLPGKSILGKPIMKLPN 66
            ||.|.......|...:::..|  .||:|..||..|.|.|||:|:||:.|..|.::||:.::.||:
  Rat    69 AGVPGSGDNAPTTEALFVALG--AGVTALSHPLLYVKLLIQVGHEPMPPTLGTNVLGRKVLYLPS 131

  Fly    67 IFQYAGHIRRIDGFYGCYRGLAPKLVGSLVAMVVSDRVADQLGLEQPEE--NKDDSQLSDEELYV 129
            .|.||.:|.::||..|.:|||:|:|:.:.::.|....:......::.|:  ||||.:.|      
  Rat   132 FFTYAKYIVQVDGKIGLFRGLSPRLMSNALSTVTRGSMKKVFPPDEIEQVSNKDDMKTS------ 190

  Fly   130 QFKKSLKR---DIVLMVSGVVASHPFHVISLRMMAQFVGRETLYTSIVGSVAEIWKSEGIAGFFA 191
             .||.:|.   ::::.....:.:||.||||:|.|.||||||..|:.::.|:.:|:|.||:.|||.
  Rat   191 -LKKVVKETSYEMMMQCVSRMLAHPLHVISMRCMVQFVGREAKYSGVLSSIGKIFKEEGLLGFFV 254

  Fly   192 GLVPKLLGDLACLVLSSSTIYILNKYIIKDK-------LGRQYNSG-----------FTQF---- 234
            ||:|.||||:..|...:...:.:|.|::.|.       ||...|.|           :|:|    
  Rat   255 GLIPHLLGDVVFLWGCNLLAHFINAYLVDDSVSDTPGGLGNDQNPGSQFSQALAIRSYTKFAMGI 319

  Fly   235 AVSSLLYPLQVVSTCSAVSGSRLMAAQPPIMPAYRNWVDCWNDLQVRGELKRGSSLFWRSQSISS 299
            |||.|.||..:|....||:...|.|..||..|.:::|:.||..|.|:|:|.|||||.:|..|..|
  Rat   320 AVSMLTYPFLLVGDLMAVNNCGLQAGLPPYSPVFKSWIHCWKYLSVQGQLFRGSSLLFRRVSSGS 384

  Fly   300  299
              Rat   385  384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtchNP_001246525.1 Mito_carr 142..222 CDD:278578 33/79 (42%)
Mtch1NP_001094303.1 Mito_carr 76..173 CDD:395101 34/98 (35%)
Mito_carr 206..>264 CDD:395101 29/57 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349365
Domainoid 1 1.000 78 1.000 Domainoid score I8578
eggNOG 1 0.900 - - E1_KOG2745
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 195 1.000 Inparanoid score I3743
OMA 1 1.010 - - QHG49093
OrthoDB 1 1.010 - - D1439019at2759
OrthoFinder 1 1.000 - - FOG0004199
OrthoInspector 1 1.000 - - mtm9121
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10780
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4015
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.870

Return to query results.
Submit another query.