DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13875 and RASSF8

DIOPT Version :9

Sequence 1:NP_001261185.1 Gene:CG13875 / 38024 FlyBaseID:FBgn0035104 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_651411.1 Gene:RASSF8 / 43096 FlyBaseID:FBgn0261986 Length:607 Species:Drosophila melanogaster


Alignment Length:616 Identity:107/616 - (17%)
Similarity:205/616 - (33%) Gaps:228/616 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IWVNGEEHWISGADSSTTCADLICALISYQIDQKHVLSKEEILAPQQFAIVQKQRHYEEYLDSSA 88
            :||.|.:..:.|...:|||.|::.||       .|...|     ..:|.::::.|:.|.:|    
  Fly     5 VWVEGIQRIVCGVTVNTTCQDVVFAL-------AHATGK-----VGRFTLIERWRNNERHL---- 53

  Fly    89 RLLDVITSPHAMPKE------EY----QLHLRHLATSSRKQ------------------VPTTDK 125
                   :|:..|.:      ||    |..|:.....:::|                  |.||.|
  Fly    54 -------APNENPMKLLLKWGEYANDVQFILQRSENKTQQQQQQQQQQQQNNNNNNNYAVMTTTK 111

  Fly   126 DSGMGSPVDSSRSMRIRRRGKLLSTKTTDNIN--TKQSKRS------------------RKQQQR 170
                 .|:..:.:...:....||..|:...::  ||:.|:|                  .:|||.
  Fly   112 -----KPLGPNNNNNNKPAPTLLKQKSNVELSYRTKELKKSFGGHDAKQFDNIGIVKGIPQQQQL 171

  Fly   171 NHHLT--------PNESLLTIILAQDETILQQMTMLHEK-------------------------- 201
            ....|        |.|.|    ..||...:..:...|||                          
  Fly   172 QSQQTAMGAPASPPQEQL----TPQDNNNVAPLVPKHEKSLSNPLDMTSTGSNPPAPTNGYNDFY 232

  Fly   202 ------DRQIF-KIEEEKHQVRERELGKNYLLETYLKDLDEPQEKGEDLELFEEMTHIDVD---- 255
                  ::.|: ::.:..:::|.....:.|    |..:.:.........||:::...|..:    
  Fly   233 NNNSSSNQHIYSQLSKSSNELRRSSPNEMY----YNNNNNIVNNNNNSPELYKQTPTISANGALV 293

  Fly   256 ----RD-------------------FGIMSDSTVQT-----------------------ALNSG- 273
                ||                   ...||:::..|                       |:..| 
  Fly   294 PPPYRDPPPPRNSPMCQGQRLASSNADTMSNASSSTNPFLSDYDQHSSHNTNSINNNSQAMEEGE 358

  Fly   274 -----TMQDDIR---LYWLEKIHEVNKELQCEEELLLSLHSKVRRHQVKRAYQTK--SEVLLQIE 328
                 |..:|:.   .:..|||.....|||..:..::.|.||.|.|    |::..  |..:.:.:
  Fly   359 PMFQTTQYNDLLQLIKFQREKITAQQMELQKFDTEIVYLESKERDH----AHELDAISREISKAD 419

  Fly   329 RLDTELATQVADIHHVERKLFTANEQ---LKAKLAVLECLSREFETTVSGGVQEGDVATGSNASA 390
            ::..:.:.|:..:.:||.:.....:|   ||:::|:|.                          :
  Fly   420 QIFRQGSEQLQTLQYVEEENELVKQQEKTLKSEIALLR--------------------------S 458

  Fly   391 KVQQSQSDDLQHAGNWLHVVKRLFAAD-HLNRRLTQQALSEKNLTDRLIPSKGISKQMFEVLRSP 454
            |:...:::.||....     .||...| .|.::..||...:....|.|:..:.|..::.:.|.:.
  Fly   459 KLANCETELLQCKNK-----MRLLMDDIELEQQHQQQTNRQTVERDFLMEMERIQSEIDQALHNT 518

  Fly   455 DPS--TSNSVNKKELSTRQAIS-LERDIQHL 482
            |.|  |::|:.|:.|....||: .:|.::.|
  Fly   519 DTSNKTADSLKKELLMIEHAIADKKRQVEQL 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13875NP_001261185.1 None
RASSF8NP_651411.1 UBQ 1..81 CDD:294102 22/98 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448968
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1574
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR15286
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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