Protein Alignment Vdup1 and LDB19

DIOPT Version :10

• Sequence 1: NP_612004.2
• Gene: Vdup1 / 38023
• FlyBaseID: FBgn0035103
• Length: 342
• Species: Drosophila melanogaster
• Sequence 2: NP_014967.3
• Gene: LDB19 / 854500
• SGDID: S000005849
• Length: 818
• Species: Saccharomyces cerevisiae
• Alignment Length: 365
• Identity: 75/365 - (20%)
• Similarity: 123/365 - (33%)
• Gaps: 131/365 - (35%)

  Fly    32 ELQDETPALGLHFHVVGEGVVRNGRRQERTYDKENYIDFRMRLLGDVDQGGPAILSPGIHSFPFK 96
            ||::.:........::.:|.:::|.:.:  :|....|:    |:.::|..|   |:.|: |.|..
Yeast   461 ELKNNSSLFTEEVRIISKGEMKSGWKTD--FDNNGKIE----LVTEIDCMG---LNSGV-SNPVM 515

  Fly    97 LGLPLGLPST----------------FLGRY-------------GWIQFYCKAALRENNGIIHK- 131
            ....|..|||                .||.|             ..:|:.....:|:.|....|
Yeast   516 HASTLQTPSTGNKKPSINVACDIQDPNLGLYVSHILAVEIVVAEETLQYANGQPIRKPNSKNKKE 580

  Fly   132 -NHQVFIVMNPIDLNLEK--PILAQPFTCEVEHKLGVVCVGGGQIKCRVSLDRGGYVPGENILVT 193
             |:....|.|| |..|.:  ||.|...|.:| .::|                     |.:   :|
Yeast   581 TNNNTMNVHNP-DQRLAELSPIFANRNTPKV-RRMG---------------------PED---IT 619

  Fly   194 AFISNYSNVSIKRTKAS---LTETIEYLARG--KVVQTEKRELAVLVRGKIRPGAKDEWHNELYV 253
            ...||.||.|..:.|||   ....|..:..|  :|::.:.| |.|..|.    |....|..|  |
Yeast   620 PVNSNKSNHSTNKEKASNGASNSNIVSVPTGAARVLRMQFR-LTVTERS----GLGISWDEE--V 677

  Fly   254 PPL--------PPTNLHGCHLIKISYDVFFVIEPKSMEKEIKLQLPIVLATYPFRHSGDAVNAN- 309
            ||:        ||     |:.:             |:...||.:|...::| |.|...|.|..:
Yeast   678 PPIYQDVELLSPP-----CYEL-------------SINNGIKNKLYSTMST-PVRSEDDFVGGSD 723

  Fly   310 ----------------------TWPESVLKPDTHTHYPST 327
                                  |..:..:.|..|.:.|::
Yeast   724 EDIGNYESQGLEPGPNVQEVTITQNKLTIPPTAHHYQPAS 763

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vdup1	NP_612004.2	Arrestin_N	8..145	CDD:451447	29/143 (20%)
		Arrestin_C	171..299	CDD:214976	31/140 (22%)
LDB19	NP_014967.3	LDB19	144..346	CDD:404030