DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vdup1 and CG1105

DIOPT Version :10

Sequence 1:NP_612004.2 Gene:Vdup1 / 38023 FlyBaseID:FBgn0035103 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster


Alignment Length:336 Identity:88/336 - (26%)
Similarity:140/336 - (41%) Gaps:30/336 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DNTSLLYFPGQFLSGRVLIELQDETPALGLHFHVVG---------------EGVVRNGRRQERTY 62
            ||....|:.||.::|:|...........|:....:|               ||...|...|.:.:
  Fly    11 DNPWNTYYAGQTVNGQVKFTFDSPKKVRGIIIRFLGEANTEWSEEKSVTTSEGKTENEVTQLKGH 75

  Fly    63 DKENYIDFRMRLLGDVDQGGPAILSPGIHSFPFKLGLPLGLPSTFLGRYGWIQFYCKAALRENNG 127
              |.|...:..|||. .......|.||.|::||...||..|||:|.|.:|.:::..|..|.....
  Fly    76 --EEYFKIQYYLLGG-KNSSETELPPGTHTYPFTCALPPNLPSSFEGEFGHVRYTIKVTLDRPWK 137

  Fly   128 IIHKNHQVFIVMNPIDLNLEKPILAQPFTCEVEHKLGVVCVGGGQIKCRVSLDRGGYVPGENILV 192
            ........|.|:.|:|||| .|.:.:||..|:|......|...|.:....::.:.|:|.|:.:.:
  Fly   138 FDQDMKMAFTVIAPVDLN
L-NPRVKEPFKLELEKSFCCFCCRSGPLAVITNIPQTGFVSGQVLPI 201

  Fly   193 TAFISNYSNVSIKRTKASLTETIEYLARGKVVQTEKRELAVLVR----GKIRPGAKDEWHNELYV 253
            |..:.|.|||::...|..|.:.:.:  .....::||||..|::.    |.:..|....:..::.:
  Fly   202 TCEVDNTSNVNLTAVKFELRKLVTF--HTNQPRSEKRESKVIIANLSVGPVNGGESRTFTQQMEI 264

  Fly   254 PPLPPTNLHGCHLIKISYDVFFVIEPKSMEKEIKLQLPIVLATYPFRHSGDAVNANTWPESVLKP 318
            |.||||||..|.:|.:.||:....|.....:.:..::||.|.|.|.............|.:|...
  Fly   265 PALPPTNLLNCGIIALDYDLHVECEVSGPHRNLTGKVPITLGTIPLAGVRPPTQFTDAPSAVQSE 329

  Fly   319 DTHTHYPSTLP 329
            |     ||..|
  Fly   330 D-----PSLAP 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vdup1NP_612004.2 Arrestin_N 8..145 CDD:451447 38/146 (26%)
Arrestin_C 171..299 CDD:214976 34/131 (26%)
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 38/146 (26%)
Arrestin_C 178..310 CDD:214976 34/133 (26%)

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