DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vdup1 and LOC3290520

DIOPT Version :10

Sequence 1:NP_612004.2 Gene:Vdup1 / 38023 FlyBaseID:FBgn0035103 Length:342 Species:Drosophila melanogaster
Sequence 2:XP_550973.4 Gene:LOC3290520 / 3290520 VectorBaseID:AGAMI1_007625 Length:355 Species:Anopheles gambiae


Alignment Length:369 Identity:83/369 - (22%)
Similarity:153/369 - (41%) Gaps:54/369 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPR----KLLKFLIIF-DNTSLLYFPGQFLSGRVLIELQDETPALGLHFHVVGEGVV-------- 52
            ||:    |.:|..|:| ||:|.::..|..::|.:.:.|.......|:...:.|...|        
Mosquito     1 MPKEKTSKHVKCDILFDDNSSGIFTAGDRVTGVIELHLTKIKKVRGVCLLISGYSAVLWEAKVPD 65

  Fly    53 --RNGRRQERTYDKENYIDFRMRLLGDVDQGGPAILSPGIHSFPFKLGLPLGLPSTFLGRYGWIQ 115
              :|.:.:.:...:|::|..:..|.|. :.|....|.|.:..:.|...:|...|::..|:||.::
Mosquito    66 GPKNKKVKAQFKGREDFIKQKQYLAGS-ENGAGMQLPPNLVRYKFDFSIPPEAPTSMEGKYGHVR 129

  Fly   116 FYCKAALRENNGIIHKNHQVFIVMNPIDLNLEKPILAQPFTCEVEHKLGVVCVGGGQIKCR---- 176
            :..:..|.......|...|.|.|:...|||....:|..|  ...|:.:...|   |..:.|    
Mosquito   130 YLLQVTLERPWKFDHNFQQPFTVVCRADLNQSNEVLCIP--TRAENMMTFYC---GLCRSRPLMV 189

  Fly   177 -VSLDRGGYVPGENILVTAFISNYSNVSIKRTKASLTETIEYLARGKVV---QTEKRE----LAV 233
             .:..:.||.|||.|.:..|:.|.|.|::...:....:.:::.::.:|:   |..|.|    ..|
Mosquito   190 SATTPKSGYAPGETIELEVFVQNSSKVTVSVIEIRWQKILKFTSQTRVIGQTQIPKEESNVQYEV 254

  Fly   234 LVRGKIRPGAKDE----WHNELYVPPLPPTNLHGCHLIKISYDVFFVIEPKSMEKEIKLQLPIVL 294
            |...|| |..:.|    :.....|.|:|.|......::.:.|::..|::|::..|.:||.:||.:
Mosquito   255 LEVRKI-PSIEGENDARFVESFVVGPVPSTETTHSRIVAVEYELALVVKPQASTKRMKLNIPITI 318

  Fly   295 -------ATYPFRHSGDAVNANTWPESVLKPDTHTHYPSTLPIF 331
                   :..|:..||.....|         ||...:.|..|.:
Mosquito   319 GQIPLAGSAMPYAMSGGLQKLN---------DTLNEHSSAPPAY 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vdup1NP_612004.2 Arrestin_N 8..145 CDD:451447 31/147 (21%)
Arrestin_C 171..299 CDD:214976 34/150 (23%)
LOC3290520XP_550973.4 Arrestin_N 12..159 CDD:451447 31/147 (21%)
Arrestin_C 183..323 CDD:214976 33/140 (24%)

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