Protein Alignment Vdup1 and arrd-3

DIOPT Version :10

• Sequence 1: NP_612004.2
• Gene: Vdup1 / 38023
• FlyBaseID: FBgn0035103
• Length: 342
• Species: Drosophila melanogaster
• Sequence 2: NP_496010.2
• Gene: arrd-3 / 187498
• WormBaseID: WBGene00006429
• Length: 287
• Species: Caenorhabditis elegans
• Alignment Length: 299
• Identity: 66/299 - (22%)
• Similarity: 106/299 - (35%)
• Gaps: 80/299 - (26%)

  Fly     8 FLIIFDNTSLLYFPGQFLSGRVLIELQDETPALGLHFHVVG-------------EGVVR-NGRRQ 58
            |.|:.|..:..|.|.:.::|.|:|..:.|..|..|..::.|             ..||| ||...
 Worm     4 FRIVLDRDTCKYRPEECVTGNVVIINRKELKARTLRVYIKGYQKTSWKEIQQKPSLVVRSNGVNV 68

  Fly    59 ERTY------DKENYIDFRMRL---LGDVDQGGPAILSPGIHSFPFKLGLPLGLP-----STFLG 109
            :.|.      :...||...|.|   ..|.|     .:.||.|.|||...||...|     :|::.
 Worm    69 KSTIKLKSHGENIQYIHLYMTLWNFTSDTD-----CIKPGTHKFPFSFKLPADCPPIVPNATYIP 128

  Fly   110 RYGWIQFYCKAALRENNGIIHKNHQVFIVMNPIDLNLEKPILAQPFTCEVEHKLGVVCVGGGQIK 174
            :          .|::.||.:.||..||.                        |.|:|.|
 Worm   129 K----------DLQQINGAVSKNIGVFF------------------------KSGIVSV------ 153

  Fly   175 CRVSLDRGGYVPGENILVTAFISNYSNVSIKRTKASLTETIEYLARGKVVQTEKRELAVLVRGKI 239
             :.|..:...:.||.|.:|..|.|.|..:::.....:.....:.|:.:...|.:|::.:.....:
 Worm   154 -KTSFPQRVLITGEVIPLTLLIDNKSTCTVREVGVRIFRIARFYAKDQEKMTRQRKIMIRKSINV 217

  Fly   240 RPGAKDEWHNELYVPPLPPTNLHGCHLIKISY----DVF 274
            .|..:.:...|..|.....|  ....||::.|    |||
 Worm   218 EPNTEQQELIEFKVHETVQT--FESDLIEVKYLMHVDVF 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vdup1	NP_612004.2	Arrestin_N	8..145	CDD:451447	41/164 (25%)
		Arrestin_C	171..299	CDD:214976	21/108 (19%)
arrd-3	NP_496010.2	Arrestin_N	4..>119	CDD:451447	32/119 (27%)
		Arrestin_C	147..275	CDD:214976	25/117 (21%)