DRSC/TRiP Functional Genomics Resources

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Protein Alignment p130CAS and nedd9

DIOPT Version :9

Sequence 1:NP_001097456.2 Gene:p130CAS / 38021 FlyBaseID:FBgn0035101 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001070750.1 Gene:nedd9 / 768136 ZFINID:ZDB-GENE-061013-318 Length:783 Species:Danio rerio


Alignment Length:864 Identity:236/864 - (27%)
Similarity:382/864 - (44%) Gaps:196/864 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 QKLYAKAIYDNYADTSDELPFKKGDILTVLEQDTEGFQGWWLCSLRNRQGLCPGNRLRVL--NSY 140
            :.|.|||:|||..::.:||.|:|||||||:||:|.|.:|||||||..|||:.|||||::|  ..:
Zfish     4 KNLMAKALYDNVPESPEELAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIAPGNRLKLLIGPMF 68

  Fly   141 DSGCFSPSPASSPVPSLAASTATLDSSICSAEIYE----NGSVISAVSSSNSNSGGASSGLGSES 201
            |    ..:||:   ||...|.......:....:|:    :.|:.....|::.........|.:: 
Zfish    69 D----GQTPAT---PSPPHSHTLQQRPLTPQGVYQVPPSHQSIYQTPPSNDLYQVPHRGALAAD- 125

  Fly   202 VSRVSRRSWHASPTKVITPQRHGDVY-----------IYNYSP---------------GSATGSG 240
                      .:|.||:||.|.|..|           :|:..|               |..:.|.
Zfish   126 ----------GTPCKVVTPVRVGQTYAFSPASDSSHDLYDVPPVRPQGVYDIPANKQSGQQSLSR 180

  Fly   241 ARAAPSTPQQQ-IY----SNQSIYQNFAMMSSPRQNASGSEFETYDIPKPATPVPLN-YDSPRSG 299
            |:....||..: :|    ::|.:|.     :.|.:|.:..:...||.|:|:...... ||.|.:.
Zfish   181 AQGVYDTPASRGLYDIPPASQGVYS-----TPPCRNNTAQDEGNYDFPQPSKHKQEGIYDVPPAS 240

  Fly   300 LPKA---SNSTTTSSSSLGTRFETLKSVAASIAEESYDVPRPLILGSNQLQQQMSQMTPSSSASS 361
            |.|:   ||.....||...:|  .:|:.:|.|    ||||                      ||.
Zfish   241 LSKSSPCSNYDFPPSSEQMSR--KVKNDSAGI----YDVP----------------------ASQ 277

  Fly   362 LLTSDSLSLSFSSSNRSSLANMPDYDIPRRNP----LPVRRQQSGLTYDFP------LPPLQEQV 416
            |..|.|..|               |||||..|    ....|.::...||.|      :..:.:.|
Zfish   278 LAASGSQDL---------------YDIPRGMPQNRHASSERDRNKSVYDIPPTDTRMVGDITDGV 327

  Fly   417 PRVL-----CTPSTVTTT---------KELPLELSSALETLAKLQLQTTAAINRLLSFVV-PNWR 466
            .|:.     .|.|:::|:         ..|.|:|.||::.|.::|....::::.|.:... ||||
Zfish   328 NRLSFSSTGSTRSSMSTSSSSAGSPAESRLALDLDSAVQRLNRVQQNLESSVSALQTLTASPNWR 392

  Fly   467 TRAQLEPAIMDLKLAALRLRTTLHDLAEFGEGALGNATRSEDRNLALKLRPLVRALRDANKLIHD 531
            |.:.:|....:::::..|::.::.|...||.||..|||...|:.|..|||..::.|.|:::::..
Zfish   393 TYSFMERHANEVRVSLERVKLSMSDFLIFGRGASANATALSDQGLHAKLRRQLQRLEDSHQILLQ 457

  Fly   532 SSESLDAQGAWSIDQLARSDEKHGCRPPDALDQLMVCAQTLTEDVRSTTSFIQGNASLLFKR--- 593
            ..::|: ...|:::.|......|.  ..|.|::.::.::||.:|.|...|.|..:|.|||:|   
Zfish   458 IYQTLE-DNNWALNILTAGGMHHS--KSDELERFVMVSRTLPDDARQLASTIGSSAELLFRRAPI 519

  Fly   594 ----------------------QLTVGHNGGSGTGVLEGSRGSAEWLEDYDYVAFESKDAAARKN 636
                                  ...|.|:..:    :...:....|::|||||..:.||...|:.
Zfish   520 EGIVHPFTCNPTEDNGFRSQSKPFPVSHDKAN----MNSEKCVKSWMDDYDYVHLQGKDEFERQQ 580

  Fly   637 EALRE----------AIPADLKTQF----DTVIRTAE-------SSAMGAGSGSIPTTPTARTTP 680
            :.|.|          .:..|...||    ..||:..|       |.....||.|..::.......
Zfish   581 KKLLEKENITKQGKVQLGQDQLNQFKQLEQDVIKPVENDITKWISHQNSTGSSSSDSSSNFSMGG 645

  Fly   681 TTPCKSPEMTDKDKKLVRYYAQQISTHMGNLMQAIDSFLETVEKNQPPKFFIAYGKFVVVSAHNL 745
            ..|     :..:|::|:.:||.|...|...|:.|:|:|...|:..|||:.|:|:||||::|||.|
Zfish   646 GAP-----LCSRDRQLLGFYADQCEQHFVTLLNAVDAFFGCVKSGQPPRIFVAHGKFVILSAHKL 705

  Fly   746 VTIGDNVYRNISKEALREKILRCTNALSDALKTCVLKSKKAAAHFPSGSAVQEMVDSVVHINNLA 810
            |.|||.:.|..:...:..:::..:|.|.:.|||.|..:|.||.|:|:.:|||||||.|..:::||
Zfish   706 VFIGDTLSRQATVAEVANRVMNLSNMLCEMLKTVVSSTKIAALHYPNTAAVQEMVDRVTDLSHLA 770

  Fly   811 RDLKSVMLQAVHLSTAAGV 829
            :..|      |.||..||:
Zfish   771 QQFK------VQLSQMAGL 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p130CASNP_001097456.2 SH3_CAS 81..136 CDD:212778 35/54 (65%)
Serine_rich_CAS 434..596 CDD:211403 46/187 (25%)
DUF3513 612..817 CDD:288849 73/225 (32%)
nedd9NP_001070750.1 SH3_NEDD9 7..63 CDD:212935 35/55 (64%)
Serine_rich_CAS 356..519 CDD:298275 47/165 (28%)
DUF3513 556..777 CDD:288849 74/231 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576684
Domainoid 1 1.000 122 1.000 Domainoid score I5594
eggNOG 1 0.900 - - E1_28I76
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I3040
OMA 1 1.010 - - QHG46840
OrthoDB 1 1.010 - - D1086228at2759
OrthoFinder 1 1.000 - - FOG0004232
OrthoInspector 1 1.000 - - otm26517
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10654
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2975
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.870

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