DRSC/TRiP Functional Genomics Resources

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Protein Alignment p130CAS and efs

DIOPT Version :9

Sequence 1:NP_001097456.2 Gene:p130CAS / 38021 FlyBaseID:FBgn0035101 Length:831 Species:Drosophila melanogaster
Sequence 2:XP_012819883.1 Gene:efs / 734004 XenbaseID:XB-GENE-490351 Length:749 Species:Xenopus tropicalis


Alignment Length:911 Identity:205/911 - (22%)
Similarity:312/911 - (34%) Gaps:308/911 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VATYHTLPESQTSSVLAKHQQRQLKEPQQP------PQYV--------INSVAMHAKTTTANSIT 67
            :..::|||     |:......|  |.|..|      |.:|        :...|:.....|.:.:|
 Frog    37 ILLFNTLP-----SLWKLPSSR--KSPPLPAFHFILPTFVRSLSLPLLLLPFALAQNCRTGSEVT 94

  Fly    68 ---GGTLHRAKSAQKLYAKAIYDNYADTSDELPFKKGDILTVLEQDTEGFQGWWLCSLRNRQGLC 129
               |..|.||:.||     |:|||.|::.:||.|::||::.|||:|.....|||.||||.:||:.
 Frog    95 RCLGRPLFRAQLAQ-----ALYDNAAESPEELSFRRGDVMLVLERDAPSLGGWWRCSLRGQQGIA 154

  Fly   130 PGNRLRVLNSYDSGCFSPSPASSPVPSLAASTATLDSSICSAEIYENGSVISAVSSSNSNSGGAS 194
            |||||::|..     .|...:....|.....||...    ...|.|.|:..:.....|..:|   
 Frog   155 PGNRLQLLPE-----TSQQESEYQAPRFLGVTAEAG----RLHINEKGAQENREEPQNHETG--- 207

  Fly   195 SGLGSESVSRVSRRSWHASPTKVITPQRHGDVYIYNYSPGSATGSGAR----AAPSTPQQQIYSN 255
                                     ||......:|.      ..|.||    |.|:..|..||  
 Frog   208 -------------------------PQHQTGTEVYQ------VPSIARLCLSAQPTEAQDDIY-- 239

  Fly   256 QSIYQNFAMMSSPR--QNASGSEFETYDIPKPATPVPLN----YDSPRSGLPKASNSTTTSSSSL 314
                      :|||  ........|.||.|......|::    ||||      |....:|.|:::
 Frog   240 ----------NSPRLVGPCIQQPLEVYDTPAALRREPISALDIYDSP------ALRVKSTDSAAV 288

  Fly   315 GTRFETLKSVAASIAEESYDVPRPL-----------------------------------ILGSN 344
                     |...|.|:.||||...                                   ||.|.
 Frog   289 ---------VPEEIPEDIYDVPPTFNKSPSDDEEDEGVYSMPSNLKRVSGLHNLYEAPEDILSSG 344

  Fly   345 QLQQQMSQMTPSSSASSLLTSDSLSLSFSSSNRSSLANMPDYDIPRRNPLPVRRQQSGLTYDFPL 409
            ||.:.: |..|:...|...|..:.|...|.|..|:                             :
 Frog   345 QLPETV-QPPPAQRLSVCSTGSTRSADSSGSRESN-----------------------------I 379

  Fly   410 PPLQEQVPRVLCTPSTVTTTKELPLELSSALETLAKL--QLQTTAAINRLLSFVVPNWRTRAQLE 472
            |||....||   ...|.|            :|.|..|  :||.:         :||         
 Frog   380 PPLSIWEPR---NDGTCT------------MEGLRMLHQELQVS---------IVP--------- 411

  Fly   473 PAIMDLKLAALRLRTTLHDLAEFGEGALGNATRSEDRNLALKLRPLVRALRDANKLIH------- 530
                  .||.          ||...|..|    .||...|.|   ::.||||...:.|       
 Frog   412 ------VLAG----------AEKSTGPGG----PEDSGTAKK---VLGALRDFLVMAHVAGLRSC 453

  Fly   531 -DSSESLDAQGAWSIDQLARSDEKHGCRPPDALDQLMVCAQTLTEDVRSTTSFIQGNASLLFKRQ 594
             .|..:|..:.:..:|||     :|..|............|.:.|........:..||.|||.|.
 Frog   454 QASDPALHGELSVHLDQL-----EHAARELVNKGSEKTLFQLILEHSNCFVRIVSANAGLLFPRP 513

  Fly   595 LTVGHNGGSGTGVLEGSRGSAEWLEDYDYVAFESKDAAARKNEALREA--------------IPA 645
                            ...|:|.|......|..:...|.::..::::.              :..
 Frog   514 ----------------RLSSSESLSRRPLPALPTASPAIQRKGSIQDRPLPPPPTLQHVVSDLSD 562

  Fly   646 DLKTQFDTVIRTAESSAMGAGS----------------GSIPTTPTARTTPTTPCKSPEMTDKDK 694
            |:.::::.:..|........||                |.:......:..|     .||::::|.
 Frog   563 DIHSEYERIKCTDNHYVHLQGSITAQNISKHKDRQTDMGQVSAQEERQIEP-----FPELSEEDH 622

  Fly   695 KLVRYYAQQISTHMGNLMQAIDSFLETVEKNQPPKFFIAYGKFVVVSAHNLVTIGDNVYRNISKE 759
            .|:.:||.|..:|:..|:..:.:||.:. .:|||:.|:.:||.:|::||.||.|||.:.|.:|..
 Frog   623 HLLHFYATQSHSHLQTLLSCVGTFLGSA-SSQPPRVFVGHGKQLVIAAHKLVFIGDTLGRLLSCP 686

  Fly   760 ALREKILRCTNALSDALKTCVLKSKKAAAHFPSGSAVQEMVDSVVHINNLARDLKSVMLQAVHLS 824
            .|:.::.....||..|||..||.:|:|||.:|:.:|::.|..:|           ||:....|..
 Frog   687 QLQTRLTGEGAALCQALKEVVLATKEAAALYPAPAALKAMAGTV-----------SVLCTCAHSF 740

  Fly   825 T 825
            |
 Frog   741 T 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p130CASNP_001097456.2 SH3_CAS 81..136 CDD:212778 28/54 (52%)
Serine_rich_CAS 434..596 CDD:211403 37/171 (22%)
DUF3513 612..817 CDD:288849 55/234 (24%)
efsXP_012819883.1 SH3_EFS 105..165 CDD:212936 31/69 (45%)
Serine_rich_CAS 395..>482 CDD:298275 29/132 (22%)
FAT-like_CAS_C 620..748 CDD:300863 45/134 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1086228at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10654
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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