DRSC/TRiP Functional Genomics Resources

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Protein Alignment p130CAS and Nedd9

DIOPT Version :9

Sequence 1:NP_001097456.2 Gene:p130CAS / 38021 FlyBaseID:FBgn0035101 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001011922.1 Gene:Nedd9 / 291044 RGDID:1306276 Length:833 Species:Rattus norvegicus


Alignment Length:898 Identity:229/898 - (25%)
Similarity:372/898 - (41%) Gaps:228/898 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 QKLYAKAIYDNYADTSDELPFKKGDILTVLEQDTEGFQGWWLCSLRNRQGLCPGNRLRVLNSYDS 142
            :.|.|:|:|||..:.::||.|:|||||||:||:|.|.:|||||||..|||:.||||:::|   ..
  Rat     4 KNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIVPGNRVKLL---IG 65

  Fly   143 GCFSPSPASSPVPSLAASTATLDSSICSAEIYE--NG-----SVISAVSSSNSNSG----GASSG 196
            ....||....|.|      ..:..:....::|:  |.     ..|..|..|..|.|    ....|
  Rat    66 PVQEPSSHEQPTP------GPMHQNFGQQKLYQVPNSQAAPRDTIYQVPPSYQNQGIYQVPTGHG 124

  Fly   197 LGSESVSRV---------SRRSWHASPTKVITPQR--HGDVY---------IYNYSPGSATGSGA 241
            ...:.|.:|         |....|.. .|||||.|  ||.||         :|:..|...|....
  Rat   125 TPEQDVYQVPPSVQRNIGSTNGPHLG-KKVITPVRVGHGYVYEHPSRYQKDVYDVPPSHTTQGVY 188

  Fly   242 RAAPSTPQQQIYS-------NQSIYQ------NFAMMSSPRQNASGSEFETYDIPKP-------- 285
            ...||:.:..::|       .|.:|.      .:|:..|..::.:|...:.||.|.|        
  Rat   189 DIPPSSVKGPVFSVPVGELKPQGVYDIPPTQGVYAIPPSACRDEAGLREKEYDFPPPMKQDGKLD 253

  Fly   286 ATPVPLNYDSPRSGLPKASNSTTTSSSSLGTRFE-----------------TLKSVAASIA---- 329
            ..|..: ||.|       ..||.|....|.|:|.                 :|....:.:.    
  Rat   254 TRPEGV-YDIP-------PTSTKTVGKDLHTKFPCDAPGGAEPMARRHQSLSLHHAPSQVGPSGD 310

  Fly   330 --EESYDVPR--------------------------PL-----ILGSNQLQQQMSQMTPSSSASS 361
              .::|||||                          ||     ..||..:...:::::.||:.| 
  Rat   311 TQSDAYDVPRGVQFLEVPTESSEKANLEERDGVYDVPLHNPADAKGSRDVVDGINRLSFSSTGS- 374

  Fly   362 LLTSDSLSLSFSSSNRSSLANMPDYDIPRRNPLPVRRQQSGLTYDFPLPPLQEQVPRVLCTPSTV 426
              |..::|.|.:||..|||:..|..|                                       
  Rat   375 --TRSNMSTSSTSSKESSLSASPSQD--------------------------------------- 398

  Fly   427 TTTKELPLELSSALETLAKLQLQTTAAINRLLSFVVPNWRTRAQLEPAIMDLKLAALRLRTTLHD 491
               |.|.|:..:|:..|..||......|..|:|.|..:||:...:|..|.:::.|..::...|.:
  Rat   399 ---KRLLLDPDTAIGKLYWLQQTLETGICSLMSLVTIDWRSYGYMERHINEIRTAVDKVELFLRE 460

  Fly   492 LAEFGEGALGNATRSEDRNLALKLRPLVRALRDANKLIHDSSESLDAQGAWSIDQLARSDEKHGC 556
            ...|..|||.||:...:..|..|:...::.:.|:::::..:|..|: :.:||::.||.:..::.|
  Rat   461 YLHFARGALANASCLPEPVLLNKMNRELQRVDDSHQILSQTSHDLN-ECSWSLNVLAINKPQNKC 524

  Fly   557 RPPDALDQLMVCAQTLTEDVRSTTSFIQGNASLLFK----------------RQLTVGHNG---- 601
               |.||:.::.|:|:.:|.:..|:.|...|..||:                ..:...|.|    
  Rat   525 ---DDLDRFVMVAKTVPDDAKQLTTTISTYAETLFRVDPGNSHLKNGPDSITNSIEYTHTGSQMQ 586

  Fly   602 ----GSGTGVL--------------------EGSRGSAEWLEDYDYVAFESKDAAARKNEAL--R 640
                |...|.:                    :||..|  |::|||||..:.|:...|:.:.|  :
  Rat   587 PLRPGDYKGQVHNKPLPPTLSKEQPPDCSSSDGSERS--WMDDYDYVHLQGKEEFERQQKELLEK 649

  Fly   641 EAIPADLKTQFD----TVIRTAESSAMGAGSGSIPTTPTARTTPTTPCKSPEMTDKDKKLVRYYA 701
            |.|....|.|.:    :..:..|..........|.....:::.|||   :..:..:|::|:.:|.
  Rat   650 ENIMKQSKAQLEHHQLSQFQLLEQEITKPVENDISKWKPSQSLPTT---NNSVGAQDRQLLCFYY 711

  Fly   702 QQISTHMGNLMQAIDSFLETVEKNQPPKFFIAYGKFVVVSAHNLVTIGDNVYRNISKEALREKIL 766
            .|..||..:|:.|||:....|...|||:.|:|:.|||::|||.||.|||.:.|.::.:.:|.|:.
  Rat   712 DQCETHFISLLNAIDALFSCVSSAQPPRIFVAHSKFVILSAHKLVFIGDTLTRQVAAQDIRNKVR 776

  Fly   767 RCTNALSDALKTCVLKSKKAAAHFPSGSAVQEMVDSVVHINNLARDLKSVMLQ 819
            ..:|.|.:.|||.|:.:|.||.|:||.:|:||||..|..::..|:..|..:|:
  Rat   777 NSSNQLCEQLKTIVMATKMAALHYPSTTALQEMVHQVTDLSRNAQLFKRSLLE 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p130CASNP_001097456.2 SH3_CAS 81..136 CDD:212778 33/54 (61%)
Serine_rich_CAS 434..596 CDD:211403 42/177 (24%)
DUF3513 612..817 CDD:288849 69/210 (33%)
Nedd9NP_001011922.1 SH3_NEDD9 7..63 CDD:212935 33/55 (60%)
Serine_rich_CAS 400..561 CDD:298275 43/164 (26%)
DUF3513 620..827 CDD:288849 70/211 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337509
Domainoid 1 1.000 121 1.000 Domainoid score I5561
eggNOG 1 0.900 - - E1_28I76
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I3168
OMA 1 1.010 - - QHG46840
OrthoDB 1 1.010 - - D1086228at2759
OrthoFinder 1 1.000 - - FOG0004232
OrthoInspector 1 1.000 - - otm63532
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10654
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2975
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.870

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