DRSC/TRiP Functional Genomics Resources

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Protein Alignment p130CAS and efs

DIOPT Version :9

Sequence 1:NP_001097456.2 Gene:p130CAS / 38021 FlyBaseID:FBgn0035101 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001311337.1 Gene:efs / 100333297 ZFINID:ZDB-GENE-030131-1658 Length:990 Species:Danio rerio


Alignment Length:1065 Identity:242/1065 - (22%)
Similarity:369/1065 - (34%) Gaps:392/1065 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 SAQKLYAKAIYDNYADTSDELPFKKGDILTVLEQDTEGFQGWWLCSLRNRQGLCPGNRLRVLNSY 140
            |...:.|||::||.|::.:||.|:|||||.||.|:.:|..|||||||..|||:.|.||||:|.| 
Zfish     2 SLSTVLAKALFDNAAESPEELAFRKGDILMVLNQEQDGGPGWWLCSLHGRQGIAPANRLRLLQS- 65

  Fly   141 DSGCFSPSPASSPVPSLAASTATLDSSICSAEI--YENGSVISAVSSSNSNSGGASSG--LGSES 201
                 :.:||||     |.:.|....|:.|..:  .:.|.|       |..|...|.|  |...|
Zfish    66 -----TQAPASS-----AGTDARRAPSVDSVHLPSSQQGKV-------NGLSAEDSDGVYLSPPS 113

  Fly   202 VSRVSRRSWHASPTKVITPQ-RHGDVYIYNYSPGSATGSGAR----------------------- 242
            ::....:|..|:|.:..:.: ||.|.    ..|.|.:.||.|                       
Zfish   114 LAEGVYQSPGAAPAQCRSGELRHSDA----GRPRSHSSSGTRPRPDWGDVGVAGRPRSPSLRGRG 174

  Fly   243 -------AAPSTP--------QQQIYSNQSIYQNFAMMS-------------SPRQNASGSEFET 279
                   ..||:|        .|......|:|...:.:|             |||..::|.....
Zfish   175 GESGTLYQTPSSPVPLAAQHRSQVALPTDSVYLTPSAVSRSAAETAGESRYLSPRDASAGHSDGC 239

  Fly   280 YDIPKPATPVPLN---YDSPRSGLPKAS----------------NSTTTSSSSLGTRFETLKSVA 325
            |.:|:||.....:   |.:|.||.|.|.                .|:.:||||      ..:|.:
Zfish   240 YLVPRPAVTTLTSENLYQTPTSGAPVAGQCVAGVTSRLVDKIAPKSSPSSSSS------PSQSKS 298

  Fly   326 ASIAEESYDVPRP--------------------LILGSNQLQQQMSQMTPSSSASSLLTSDSLSL 370
            ...|...|..|.|                    ::..::...|.:.|..||...|...|:     
Zfish   299 GQDAPGMYQTPTPPGGAISRTPQSDRKNPAGTVVVSNASTPGQNIKQTPPSGRGSQKGTT----- 358

  Fly   371 SFSSSNRSSLANMPDYDIPRRNPLPVRRQQSGL--TYDF------PLPPL----QEQVPRVLCTP 423
            |.:...|..|         |.:||..|..:||:  :.:|      |.||:    ::.:|:....|
Zfish   359 STAPVGRGKL---------RESPLLTRTGKSGVPSSPNFGRKPPPPAPPVRSVTRKDLPQSSAIP 414

  Fly   424 STVTTTKELPL----------------------ELSSALETLAKL------------QLQTTAAI 454
            :|....:..|.                      |:.:..|.|:|.            ::..|...
Zfish   415 ATKPVLQANPAPPPTNMLEEERQGSKSGQTQADEMKNNSEMLSKRDSASSQEEKLSEEVYDTPPT 479

  Fly   455 NRLLSFVVPNWRTRAQLEPAIMD--------------------LKLAALRLRTTLHDLAEF---- 495
            ||        |:....:.|:..|                    ..:..|.|.::.|....:    
Zfish   480 NR--------WQHPVSIVPSEEDDGIYNTPRALIVHNDQASEIYDVPTLALNSSEHQQQTYNIPG 536

  Fly   496 GEGALGNATRSEDRNL----ALKLRPLVRALRDANKLIHDSSESLDAQGAWSIDQLARSDEKHGC 556
            ...|:|:|   ||.::    :|...||     :|::|...:.|::....::||..|.:.|.....
Zfish   537 SAAAIGDA---EDEDVYSVPSLPGLPL-----EASELSGLTVETVVNGRSYSISSLRKQDAIDDV 593

  Fly   557 RPPDA----LDQLMVCAQTLTEDVRSTTS-FIQGNASL--LFKRQLT------------------ 596
            ..||.    :..|.:...|....|.||.| .||...||  |.:..||                  
Zfish   594 SEPDGGIYDMPALNLEIPTRRLSVSSTGSGDIQWKTSLSALVQSALTSASLPTTPSRDFAAALAE 658

  Fly   597 ------VGHNGG---------------------SGT-----GVLEGSRGSAEWLEDYDYVAFESK 629
                  .||.|.                     .||     |:|...||:.|             
Zfish   659 ILSIWKAGHVGDIPPVLQHAWSRLSDLLPALSVCGTAPPADGLLSMVRGALE------------- 710

  Fly   630 DAAARKNEALREAIPADLKTQFDTVIR-------TAE----SSAMGAGSGS------IPTTPTAR 677
            |:||......|..:|:.     |::.|       .||    :..||:..||      :|..|.|.
Zfish   711 DSAALLQSQTRPRLPSQ-----DSLSRRPLPALPVAEVKPIAGDMGSRKGSWIQERPLPPPPPAA 770

  Fly   678 ------------------------------TTPTTPCKSP------------------------- 687
                                          .|||.|...|                         
Zfish   771 FPLPPAPVSLVPTVGRMEDEEPGNEYAGIGLTPTPPPSYPVGDSVGYVKLQGKPEPPPDTHTEHS 835

  Fly   688 ------------------EMTDKDKKLVRYYAQQISTHMGNLMQAIDSFLETVEKNQPPKFFIAY 734
                              .|:.:|.:|:.:|:.|..:|:..|..||||...:|:.||||:.|::.
Zfish   836 SSQLITSTDNKLSPSPPVSMSLEDSELLSFYSSQSLSHLSCLADAIDSLFTSVQGNQPPRVFVSR 900

  Fly   735 GKFVVVSAHNLVTIGDNVYRNISKEALREKILRCTNALSDALKTCVLKSKKAAAHFPSGSAVQEM 799
            ||.::|:||.||.|||.:.|.:|...||.|:...:..|..|||..|:.:|.||.::||..|.|||
Zfish   901 GKSLIVTAHKLVFIGDTLARLLSSSDLRAKVTTSSGRLCQALKAVVVATKGAAQNYPSVPATQEM 965

  Fly   800 VDSVVHINNLARDLKSVMLQAVHLS 824
            ||.|..::..|.....::.:...:|
Zfish   966 VDRVADLSQHAAGFSGLLQRLAEIS 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p130CASNP_001097456.2 SH3_CAS 81..136 CDD:212778 32/54 (59%)
Serine_rich_CAS 434..596 CDD:211403 41/230 (18%)
DUF3513 612..817 CDD:288849 74/294 (25%)
efsNP_001311337.1 SH3 6..66 CDD:302595 35/65 (54%)
FAT-like_EFS_C 858..987 CDD:211412 49/128 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576685
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1086228at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10654
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.040

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