DRSC/TRiP Functional Genomics Resources

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Protein Alignment p130CAS and cass4

DIOPT Version :9

Sequence 1:NP_001097456.2 Gene:p130CAS / 38021 FlyBaseID:FBgn0035101 Length:831 Species:Drosophila melanogaster
Sequence 2:XP_001341038.2 Gene:cass4 / 100000938 ZFINID:ZDB-GENE-110131-9 Length:793 Species:Danio rerio


Alignment Length:902 Identity:205/902 - (22%)
Similarity:341/902 - (37%) Gaps:260/902 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 QKLYAKAIYDNYADTSDELPFKKGDILTVLEQDTEGFQGWWLCSLRNRQGLCPGNRLRVLNSYDS 142
            :.|:|:|:|.|.|:|.|||.|.||:|:.|||::..|..|||.|:||.||||.|.|||..|     
Zfish     2 ETLFARALYANTAETEDELAFCKGEIILVLEKNVVGSTGWWKCALRGRQGLAPANRLAPL----- 61

  Fly   143 GCFSPSPASSPVPSLAASTATLDSSICSA----------EIYENGSVI-----SAVSSSNSNSGG 192
               ||:.|.........||.....||...          .|||:...|     ..|.|.|.....
Zfish    62 ---SPAEAEQIAAERDCSTNHSHQSIYQTPIALSKSPELPIYEDMKTIYKVPPQGVCSPNKQEDP 123

  Fly   193 ASS-----GLGSESVSRVSRRSWHASPTKVITPQRHGDVY----------IYNYSPGSATGSGAR 242
            ..:     ||.:.                   |:...|:|          ::..||...:.:...
Zfish   124 EGTRPLHDGLSAH-------------------PKTGADIYDVPNLLRKSCLFTASPLHPSETSLM 169

  Fly   243 AAPSTPQQQIYSNQ-SIYQNFAMMSSPRQNAS-----GSEFETYDIPKPA--------------T 287
            ::.....:...:|. .:.||....::....|:     |::...||.|.|:              .
Zfish   170 SSAEFHSRNEATNMLQMLQNVRCETATNHKATTLPPFGTQDPNYDFPVPSITEDSKKPRCGYSTM 234

  Fly   288 PVPLN----YDSP----RSGL---------PKASNSTTTSSSSLGTRFETLKSVAASIAEESYDV 335
            |.|..    ||.|    :.|.         ||..:|||.....|..|....|....  .:..|||
Zfish   235 PNPCKSEWIYDVPVFPQKQGCEPGYCDTLPPKDIDSTTALYDILPARIWPEKKHCP--IQPLYDV 297

  Fly   336 PRPLILGSNQLQQQMSQMTPSSSASSLLTSDSLSLSFSSSNRSSLANMPDYDIP----------- 389
            |:|.|                          ||:.|.:.:..|.::::  ||:|           
Zfish   298 PKPSI--------------------------SLTQSCTVNEYSPISSI--YDVPPCFRQTKTTAE 334

  Fly   390 ---RRNP--LPVRRQQSGLTYDFPLPPLQEQVPR------------------------------- 418
               :::|  :..:..|..|.|.....||.:|:.|                               
Zfish   335 QPRKQSPPEMDSKNGQEPLEYRGKPGPLYDQLHRWPSRGRTPFRQPLEGTVRRDNEGTRDHQRSS 399

  Fly   419 VLCTPSTVTTT------------------KELPLELSSALETLAKLQLQTTAAINRLLSFVVPNW 465
            .:.|.||.:::                  :|:.|....|...|.:|:.....::.:|:.||...|
Zfish   400 TVSTSSTASSSSRSSCDSFMLSSPEPEPLREITLSQEEAGNKLLELKEAVCQSVPKLMLFVSSQW 464

  Fly   466 RTRAQLEPAIMDLKLAALRLRTTLHDLAEFGEGALGNATRSEDRNLALKLRPLVRALRDANKLIH 530
            |:|..|...:..::.|:..:..::.....|.....|||.|..|.||..:|...:..:.|:..::.
Zfish   465 RSREHLGQHLDQIRTASEDVTDSIDSFLNFTLDVRGNAQRLTDSNLQTRLLKQLSIVEDSGLILQ 529

  Fly   531 DSSESLDAQGAWSIDQLARSDEKHGCRPPDALDQLMVCAQTLTEDVRSTTSFIQGNASLLFK--- 592
            .::.:|..|| |.::.||: |..|. :.||.|::.::.|:|:.|||:...|.:..|..|||:   
Zfish   530 QAASALRDQG-WHLEVLAQ-DAGHS-QMPDHLERFVMVARTVPEDVKRLVSMLNANGKLLFRVQV 591

  Fly   593 RQLTVGHNGGSGTGVLEGSRGSAE-----WLEDYDYVAFESKDAAARKNEALREAIPADLKTQFD 652
            ::|.|..|.||..|.   :....|     .:::.|||..::.....::.:..:.:|.:  |...|
Zfish   592 KELEVMENEGSSEGT---NHKKCEPMVDSGIDESDYVQLQTTAEIEQEPKPTKSSIKS--KRNSD 651

  Fly   653 TVIRTAESSAMGAGSGSIPTTP--TARTTPTTPCKSPEMTDKDKKLVRYYAQQISTH----MGNL 711
            ::.:.......|:     |..|  |:|..|                       ||.|    .|.:
Zfish   652 SLKKQVSKPQSGS-----PCNPIQTSRKCP-----------------------ISDHCRLYFGAI 688

  Fly   712 MQAIDSFLETVEKNQPPKFFIAYGKFVVVSAHNLVTIGDNVYRNISKEA----LREKILRCTNAL 772
            .:||..|:.::.:|:||:.||::.|.|::       :|..:...:..||    ..|::|..:|.|
Zfish   689 QKAISVFISSLNENKPPEQFISHSKLVIM-------VGQRLVNTLCSEAKSREAGEEMLAMSNQL 746

  Fly   773 SDALKTCVLKSKKAAAHFPSGSAVQEMVDSVVHINNLARDLKSVMLQAVHLSTAAGV 829
            ...||...|.:||||.:||...||||..|       :|::|..   :|.|..|:..|
Zfish   747 CAQLKQLALVTKKAALNFPDKLAVQEAHD-------IAKELAQ---RAQHFRTSLDV 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p130CASNP_001097456.2 SH3_CAS 81..136 CDD:212778 31/54 (57%)
Serine_rich_CAS 434..596 CDD:211403 43/164 (26%)
DUF3513 612..817 CDD:288849 50/219 (23%)
cass4XP_001341038.2 SH3_CASS4 4..60 CDD:212933 32/55 (58%)
Serine_rich_CAS 433..592 CDD:298275 43/161 (27%)
FAT-like_CAS_C 670..792 CDD:300863 43/161 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576682
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1086228at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10654
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.910

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