DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dic61B and dync2i2

DIOPT Version :9

Sequence 1:NP_728477.1 Gene:Dic61B / 38020 FlyBaseID:FBgn0263988 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001099160.1 Gene:dync2i2 / 794361 ZFINID:ZDB-GENE-070928-9 Length:501 Species:Danio rerio


Alignment Length:492 Identity:106/492 - (21%)
Similarity:178/492 - (36%) Gaps:110/492 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 TATMSSVKDLTSALAQTEDADTFEDDEAVAEKDKVSSQIERLFRS-PEFRNAIMYMGRT------ 330
            |.|.:..||::....||:|.               |.|...|.|. .:|...:.:|.|.      
Zfish    37 TETETQAKDVSENGTQTQDQ---------------SGQTLSLDRDLTDFPGLLDFMRRAEDVVIR 86

  Fly   331 -LSSNTNEAGLRRFRNFDQVE-RWNAEAEYVYSMNLLFRLVPEPSKDERKAVSDIDFCRSNGDIL 393
             |..|:      :...||..| .|..:.|   |::.::||....::::...|:.:.: ...|.::
Zfish    87 ELVKNS------KSHAFDGFEVNWEEQNE---SVSCMYRLQHVDAQEKSLQVTSVSW-NCTGSVI 141

  Fly   394 AVAYGLY---SFSSQHVPTSGSVFLWSIK----NPGEPERAYYYDVPVTAINFSPFLPSLLAIGL 451
            |..:|..   .:|::    ...|..|::.    ||..|:.......||..:.|.|..||::|.||
Zfish   142 ACGFGRVDDGDWSNE----KACVCTWNVDRQNLNPKRPDVIIDVATPVMCLCFHPVRPSVVAGGL 202

  Fly   452 YDGSVEVRDVSSLQDTPVAVSQRSTSPGSSPVVAIRWIKQVSDDDHETDIDPFLSLSQDGSVTRF 516
            |.|.|.|.|.|..||..:|.:..|......||..|.|:......:...     ||....|.|   
Zfish   203 YSGEVVVWDTSRSQDLILAQTGMSADTHREPVYQINWVPGARRGEFSV-----LSAGSGGRV--- 259

  Fly   517 RIIKSPFLLGFTQMILERVEGHPEGIFVHPSSRIPCESNRHPQG--------------LSITTHP 567
                          :|..::|....:.:  ||.......:.||.              .::...|
Zfish   260 --------------LLWTIDGSEAKLLL--SSGYALVRQQMPQSGAASKTRGSLTIGVTAVALSP 308

  Fly   568 LHKDIYYVLTDEGCIHKCSINYQHQYL-------EVLRC--------HDGGVTVMEFSPWSPKLF 617
            ...|.:.|.::.|.:.|||.:.:....       .:||.        ..|.:..:.|||:...||
Zfish   309 WDLDTFLVGSEGGLVLKCSFSSETAAAVPSDGESVILRAPMQFSFSPRGGPIHSVHFSPFHRNLF 373

  Fly   618 LTCGNDWFVRIWVDGITRPLLELLDEMTPVHWAKWSPTHSTIIVTVNRE-TANVWDFRRNLLRPM 681
            ::.|.|....:.......|||.|....:.|...:||||...:...|..: ...::|..|..|||:
Zfish   374 VSVGTDGLAHLHSVLQPCPLLALRVSDSYVFGVRWSPTRPLVFAAVTGQGLVQMFDLGRRSLRPV 438

  Fly   682 SKHKMDSSFNTVARFSHC-------GRTLVIGNERGN 711
            :  .:|.  |...:.::|       ...|.:||..|:
Zfish   439 A--TIDQ--NAGGQPAYCLEFNPKHTNLLAVGNADGS 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic61BNP_728477.1 WD40 358..730 CDD:225201 85/398 (21%)
WD40 repeat 381..429 CDD:293791 9/54 (17%)
WD40 433..711 CDD:295369 71/314 (23%)
WD40 repeat 434..473 CDD:293791 17/38 (45%)
WD40 repeat 552..599 CDD:293791 10/67 (15%)
WD40 repeat 604..637 CDD:293791 7/32 (22%)
WD40 repeat 645..682 CDD:293791 11/37 (30%)
WD40 repeat 691..727 CDD:293791 6/28 (21%)
dync2i2NP_001099160.1 WD40 66..481 CDD:225201 95/448 (21%)
WD40 repeat 130..180 CDD:293791 9/54 (17%)
WD40 repeat 187..229 CDD:293791 17/41 (41%)
WD40 repeat 235..296 CDD:293791 12/84 (14%)
WD40 repeat 301..338 CDD:293791 7/36 (19%)
WD40 repeat 361..399 CDD:293791 11/37 (30%)
WD40 repeat 403..442 CDD:293791 11/40 (28%)
WD40 repeat 450..477 CDD:293791 5/22 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.