DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dic61B and Dync2i2

DIOPT Version :9

Sequence 1:NP_728477.1 Gene:Dic61B / 38020 FlyBaseID:FBgn0263988 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001008498.2 Gene:Dync2i2 / 71820 MGIID:1919070 Length:537 Species:Mus musculus


Alignment Length:473 Identity:110/473 - (23%)
Similarity:185/473 - (39%) Gaps:87/473 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 VSSYVSNFEMYDTLNNITKEFATATMSSVKDLTSALAQTEDADTFEDDEAVAEKDKVS--SQIER 313
            |:|..|.:.....:...||...||.:::.:  :||.|:|. ||.....||..|...::  ||.:.
Mouse    45 VASVPSQWRSVQGIRGETKSCQTAGIATAE--SSAQARTH-ADAQVQTEAPEEPAAMAPVSQYDT 106

  Fly   314 LFRSPEFRNAIMYMGRTLSSNTNEAGLRRFRNFDQVE-RWNAEAEYVYSMNLLFRLVPEPSKDER 377
            |......|.....:.|.|::|...      ..||..| .|..:.:   :::.|..||...::.:.
Mouse   107 LRLEAFLRRVEAMVIRELNNNWQS------HAFDGYEVNWTEQQQ---TVSCLHTLVYPLAQGQG 162

  Fly   378 KAVSDIDFCRSNGDILAVAYGL-----YSFSSQHVPTSGSVFLWSIK----NPGEPERAYYYDVP 433
            ..|:.|.: .|.|.:||.|||.     :|....:|.|      |::.    ||.:|  :...:||
Mouse   163 LHVTGISW-NSTGSVLACAYGRLDDGDWSTLKSYVCT------WNLDRQGLNPQQP--SVVVEVP 218

  Fly   434 --VTAINFSPFLPSLLAIGLYDGSVEVRDVSSLQDTPVAVSQRSTSPGSSPVVAIRWIKQVSDDD 496
              |..:.|.|..||.:|.|||.|.|.|.|:|..:|..:..:..:....:.||..:.|:.: ....
Mouse   219 SAVMCLAFHPTQPSHIAGGLYSGEVLVWDMSRPEDPLLWRTGLTDDTHTDPVYQVLWLPE-PRHS 282

  Fly   497 HETDIDPFLSLSQDGSVT--------RFRIIKSPFLLGFTQMILERVEGHPEGIFVHPSSRIPCE 553
            |...:   ||.:.||.|.        :.|:.|. |.|...|:               |.|   .:
Mouse   283 HRFQV---LSAATDGKVLLWRGSGAGQLRLTKG-FALAVQQL---------------PRS---TK 325

  Fly   554 SNRHPQG------LSITTHPLHKDIYYVLTDEGCIHKCSINYQHQYLE------VLRC------- 599
            ..:.|:|      .|:........::.:.|:.|...|||:..:...|.      .||.       
Mouse   326 LKKPPRGETEVGVTSVAFSSFDSSLFVLGTEGGFPLKCSLASEVAALTRMPSSVPLRAPVQFTFS 390

  Fly   600 -HDGGVTVMEFSPWSPKLFLTCGNDWFVRIWVDGITRPLLELLDEMTPVHWAKWSPTHSTIIVTV 663
             |.|.|..:..||:...|||:.|.|..|.::.....:||..|......:...:|||....:....
Mouse   391 PHGGPVYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAQPLTSLQLSHKYLFAVRWSPVRPLVFAAA 455

  Fly   664 NRE-TANVWDFRRNLLRP 680
            :.| ...::|.:::..:|
Mouse   456 SGEGDVQLFDLQKSSQKP 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic61BNP_728477.1 WD40 358..730 CDD:225201 83/363 (23%)
WD40 repeat 381..429 CDD:293791 15/56 (27%)
WD40 433..711 CDD:295369 63/279 (23%)
WD40 repeat 434..473 CDD:293791 15/38 (39%)
WD40 repeat 552..599 CDD:293791 10/58 (17%)
WD40 repeat 604..637 CDD:293791 9/32 (28%)
WD40 repeat 645..682 CDD:293791 6/37 (16%)
WD40 repeat 691..727 CDD:293791
Dync2i2NP_001008498.2 DYNLL2 binding. /evidence=ECO:0000250|UniProtKB:Q96EX3 80..93 5/13 (38%)
WD40 101..515 CDD:225201 94/414 (23%)
DYNLRB1 binding. /evidence=ECO:0000250|UniProtKB:Q96EX3 107..132 5/30 (17%)
WD40 repeat 165..211 CDD:293791 15/52 (29%)
WD 1. /evidence=ECO:0000255 216..256 17/39 (44%)
WD40 repeat 223..265 CDD:293791 14/41 (34%)
WD 2. /evidence=ECO:0000255 265..309 9/47 (19%)
WD40 repeat 271..312 CDD:293791 8/44 (18%)
WD40 repeat 339..389 CDD:293791 9/49 (18%)
WD 3. /evidence=ECO:0000255 391..431 13/39 (33%)
WD40 repeat 396..433 CDD:293791 11/36 (31%)
WD 4. /evidence=ECO:0000255 434..474 6/40 (15%)
WD40 repeat 439..479 CDD:293791 6/35 (17%)
WD 5. /evidence=ECO:0000255 481..521
WD40 repeat 486..511 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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