DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dic61B and dync2i2

DIOPT Version :9

Sequence 1:NP_728477.1 Gene:Dic61B / 38020 FlyBaseID:FBgn0263988 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_012823678.1 Gene:dync2i2 / 448417 XenbaseID:XB-GENE-953027 Length:503 Species:Xenopus tropicalis


Alignment Length:408 Identity:90/408 - (22%)
Similarity:160/408 - (39%) Gaps:72/408 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 FDQVE-RWNAEAEYVYSMNLLFRLVPEPSKDERKAVSDIDFCRSNGDILAVAYGLY-----SFSS 404
            ||..| .|..:.|.|..::.|  ..|: :.:::..|:.:.: .|.|.|:|.:||.:     |...
 Frog    99 FDGYEVNWEEQHEQVTCLHSL--QYPD-ALEQQLQVTSVSW-NSTGSIIACSYGRFGDGDWSTEK 159

  Fly   405 QHVPTSGSVFLWSIK----NPGEPERAYYYDVP--VTAINFSPFLPSLLAIGLYDGSVEVRDVSS 463
            .:|.|      |::.    |...|:..  .|||  |..:.:.|..|||:|.||::|.|.|.|.|.
 Frog   160 SYVCT------WNLDRRGFNANNPDTV--LDVPSSVMCLAWHPSQPSLIAGGLFNGDVLVWDTSR 216

  Fly   464 LQDTPVAVSQRSTSPGSSPVVAIRWIKQVSDDDHETDIDPFLSLSQDGSVTRFRIIKSPFLL--- 525
            ..|..:..:.......:..|..:.|:::.| ..|...:   .|:|.||.:..:::.|...|:   
 Frog   217 TDDPLIGRTGHVGDTHTDAVYQVGWMQEKS-QGHRHQV---FSVSSDGKILVWQMEKEGHLVLLD 277

  Fly   526 GFTQMILERVEGHPEGIFVHPSSR------IPCESNRHPQGLSITTHPLHKDIYYVLTDEGCIHK 584
            ||. ::.:::   |....:|...|      :.|.|..|          ....::.|..:.|.:.|
 Frog   278 GFA-LVAQQI---PSNTKIHKPGRGDTAVGVTCLSYSH----------FDPSLFIVGVEGGYLLK 328

  Fly   585 CSINYQ----------------HQYLEVLRCHDGGVTVMEFSPWSPKLFLTCGNDWFVRIWVDGI 633
            ||.:.|                .|:  ....|.|.|..:..||:...|||:.|.|....::....
 Frog   329 CSSSVQTLAPINMGSSVPLRAPAQF--TFSPHGGPVYSVTCSPFHRNLFLSAGTDGHAHLYSMLQ 391

  Fly   634 TRPLLELLDEMTPVHWAKWSPTHSTIIVTVNRETANVW-DFRRNLLRPMSKHKMDSSFNTV--AR 695
            .:||:.|......:...:|||....:....:.:...|. ||.::..:|....|..:|...|  ..
 Frog   392 AKPLVSLQLSQKYLFSIRWSPVRPLVFAAASGDGEVVLVDFAKSFQKPSLCIKQTASGRPVYCLE 456

  Fly   696 FSHCGRTLVIGNERGNTL 713
            |:|....|:...:...|:
 Frog   457 FNHAQSQLLAAGDGTGTV 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic61BNP_728477.1 WD40 358..730 CDD:225201 85/395 (22%)
WD40 repeat 381..429 CDD:293791 12/56 (21%)
WD40 433..711 CDD:295369 66/307 (21%)
WD40 repeat 434..473 CDD:293791 14/38 (37%)
WD40 repeat 552..599 CDD:293791 10/62 (16%)
WD40 repeat 604..637 CDD:293791 8/32 (25%)
WD40 repeat 645..682 CDD:293791 7/37 (19%)
WD40 repeat 691..727 CDD:293791 5/25 (20%)
dync2i2XP_012823678.1 WD40 repeat 131..182 CDD:293791 13/59 (22%)
WD40 184..481 CDD:392136 67/311 (22%)
WD40 repeat 188..227 CDD:293791 13/38 (34%)
WD40 repeat 236..297 CDD:293791 14/68 (21%)
WD40 repeat 305..355 CDD:293791 10/61 (16%)
WD40 repeat 362..399 CDD:293791 10/36 (28%)
WD40 repeat 405..446 CDD:293791 8/40 (20%)
WD40 repeat 452..477 CDD:293791 5/23 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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