DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dic61B and wdr-60

DIOPT Version :9

Sequence 1:NP_728477.1 Gene:Dic61B / 38020 FlyBaseID:FBgn0263988 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001367569.1 Gene:wdr-60 / 175676 WormBaseID:WBGene00016165 Length:668 Species:Caenorhabditis elegans


Alignment Length:748 Identity:143/748 - (19%)
Similarity:258/748 - (34%) Gaps:219/748 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RSSNLDNELKKKSVVVNQTQAEESKAK-----KKDTTHYYSVETLADLQYRSQIKVLEKIY---G 76
            |||:.:.:.||:.....:..::|.|.|     ||..|.....|.....:|....:..|..:   .
 Worm     6 RSSSKEKDSKKEKKKDKEKSSKEKKEKKDKKEKKSKTIKPEPEPEPVNEYEDDFEDYEDDFEEDD 70

  Fly    77 EEVDMTPK---SIQDDTYVEQFMKYNLNVMHQMTNFTTMVAKSTTRSRTRSSVRAGIGGNKQSID 138
            ||....||   ..|.::.||..:.:..|:|.::       |.|..| ||.:|             
 Worm    71 EEEKKAPKVEEKPQKESKVEAEVSFESNIMQRL-------ATSHMR-RTEAS------------- 114

  Fly   139 DLMNGILYETINWEPYSTVEALEEAYEPKPYTKSFLKITLRKSDFFEIHSQTQTTVAKGSPEGDD 203
                                       |||....  ||           |..|.||        .
 Worm   115 ---------------------------PKPTIAP--KI-----------SNAQITV--------Q 131

  Fly   204 AERDNRNYEYLTIGKGKIRRRSDNDAQTDT-----LLFTTRAVNTILITKATVSSYVSNFEMYDT 263
            :..||:.|.|          .::.:.||..     .|...|.:.:|.:||:.|.:.:|: .:::.
 Worm   132 STIDNKPYSY----------HNEEERQTQEQRAFGRLNKLRGLISIEVTKSQVFTDLSS-NIFEP 185

  Fly   264 LNNITKEFATATMSSVKDLTSALAQTEDADTFEDD-----------EAVAEKDKVSSQIERLFR- 316
            .|::....:.|...:.||..:...|||..:|.|.:           |...||::.|:...||.: 
 Worm   186 FNSLPSNKSHALTQTGKDCHTEEVQTERGETEEKETQCPHSESTRIEDGIEKERTSTDRARLKKF 250

  Fly   317 ----SPEFRNAIMYMGRTLSSN-TNEAGLRRF-RNFDQVERWNAEAEYVYSMNLLFRLVPEPSKD 375
                :...|..::...::...: |.|..:.:| |.::.                 |||....:|.
 Worm   251 FFAATQTIREILISEDKSAEEDETREKSISKFSRGYNP-----------------FRLCQVVTKS 298

  Fly   376 ERKAVSDIDFCRSNGDILAVAYGLYSFSSQHVPTSGSVFLWSIKNPGEPERAYYYDVPVTAINFS 440
            :...:.     :...|.:.|||.::...:..:.....:..:.:.....|:|.:..:..|:.:..|
 Worm   299 KSTCIR-----KGESDSVLVAYEIFESPAPDLINKSLIVEFFVHKRRPPKRLFVVESIVSVMELS 358

  Fly   441 PFLPSLLAIGLYDGSVEVRDVSSL------------QDTPVAVSQ--------RSTSPGSSPVVA 485
            . ...:|.:.|.||:....|:|..            .:|.:|:.:        .:|...::|::.
 Worm   359 Q-SSQILYVCLMDGTFCAFDLSITDAFFDDNLPWVDSETNIALRRPTFDSSFLATTVSDATPLIG 422

  Fly   486 IRWIKQVSDDDHETDIDPFLSLSQDGSVTRF---RIIKSPFLLGFTQMILERVEGHPEGIFVHPS 547
            |. :.:.|..:..|.||      ..|:::.:   |:.|:...|..|.:|      .|     ||.
 Worm   423 IA-LGKSSVGEEITTID------TAGTISYWIANRVEKNELRLLLTAVI------RP-----HPV 469

  Fly   548 SRIPCESNRHPQGLSIT-----THPLHKDIYYVLTDEGCIH------------KCSINYQHQYLE 595
            .:      ||....:::     |:||.   :::.||.|.::            |.....:.:|.|
 Worm   470 LK------RHSTSFAVSAFCHVTNPLR---FFIGTDTGMLYSMYKSDTSQAIPKIYKTEKEKYGE 525

  Fly   596 V----LRCHDGGVTVMEFSPWSPKLFLTCGNDWFVRIWVDGITRPLLELLDEMTPVHWAKWSPTH 656
            |    ....|..|.::.||..|..::.|......|.|       |..:|   .|.|.|..||.|:
 Worm   526 VTVIAANPSDNTVLIVGFSNGSISVYRTTQASSIVNI-------PTADL---STRVTWISWSLTN 580

  Fly   657 STIIVTV-NRETANVWDFRRNLLRPMSKHKMDS 688
            .:...|: |......||....|......|:.||
 Worm   581 PSGFYTIHNSNIITYWDLGFKLSPKSVDHRTDS 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic61BNP_728477.1 WD40 358..730 CDD:225201 72/376 (19%)
WD40 repeat 381..429 CDD:293791 6/47 (13%)
WD40 433..711 CDD:295369 62/301 (21%)
WD40 repeat 434..473 CDD:293791 10/50 (20%)
WD40 repeat 552..599 CDD:293791 12/67 (18%)
WD40 repeat 604..637 CDD:293791 7/32 (22%)
WD40 repeat 645..682 CDD:293791 11/37 (30%)
WD40 repeat 691..727 CDD:293791
wdr-60NP_001367569.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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