DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6845 and snky

DIOPT Version :10

Sequence 1:NP_612000.3 Gene:CG6845 / 38019 FlyBaseID:FBgn0035099 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_648633.2 Gene:snky / 39492 FlyBaseID:FBgn0086916 Length:715 Species:Drosophila melanogaster


Alignment Length:710 Identity:169/710 - (23%)
Similarity:282/710 - (39%) Gaps:156/710 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YLCGLAVTLAWNWWQLGHLVLGLNLT--------------FAIPVALVLAVF-YSRPVRCIVTLA 74
            :|.||  .|.:..|:|.    .||.|              |.|.|.:...:| .|.|||.::.|.
  Fly    36 FLLGL--VLGFLLWKLA----ALNFTLGRLFVNGATDLYVFIIFVLVTGTIFMLSLPVRAVILLI 94

  Fly    75 LPSLCSSRGRAFLISLAFVIAAVGPTANILANLKVMLRSLACGQELLRQALGQMLDVILEP-VNA 138
            ..:|....||.:|.::||.....||.||::.|...:.|...|...|.........|::.:| .|.
  Fly    95 FVALVGKSGRTYLRAVAFAFIISGPIANLVENAGEVARVFVCTTVLTYNLSKTRFDLMAKPFTNT 159

  Fly   139 IQ-LAVDLLMREVRRVLKLAMVVLL---------RIQDQLIAIIKTLKNCAAWLKSIVDLCNTEM 193
            :: :..|  :.|:|........||:         .|:|:......|......|.:....:..:|:
  Fly   160 LKHMRGD--VEEIRHTFYELQEVLVDLKYAVENSDIEDEKYGDKNTKPIYERWGRETSRMNVSEI 222

  Fly   194 G-------TPWA-----------RCK---KTAHHAMI--------RCQSKMGVFKALCHAAKLFL 229
            |       ||.|           |||   ::.|.|.:        :|.:..        .:.:..
  Fly   223 GNGGKELPTPAAVQERFQRNMRNRCKHQLRSGHRACLEVFRNGYRKCTTNF--------PSMIAK 279

  Fly   230 ALCYPAKIIDVFCSGYWDLSWGLLDKI-----------AERYREFVRHIEEMFD--ANITFEHEF 281
            |:|:|.: :|:.|.  .|| :|..|||           .|.|.|.::..:::||  :.|...:|.
  Fly   280 AICWPYR-VDIICE--LDL-FGNPDKICDPSAVVPQNFGETYVELLKAEKKLFDNSSQIVVNYEI 340

  Fly   282 ---FFDTNSSKSLTDVGEEILQDINKRLSSFIFLSSFVD-ILCWVMVVTVFFKATIFYLRYMHSR 342
               .|..:..||....|:...:|..::...|..:...:. |||..|:..|:.... :|::|::..
  Fly   341 KDEQFAKSQLKSAERTGQAFKEDFERQKRIFNKVMGILQKILCLFMLRMVYVSIN-YYVKYLNDV 404

  Fly   343 QFQNVFLTKILSDIDRRHEKHGYDPLLPLHQLERAKYMKLTSL-RLTLFEFVSIVENACFMATTC 406
            :|.|.::||....:|:|.::...|.:|||...|::||:.:..: ..|..|..::    ||   ..
  Fly   405 EFDNFYITKYFKHVDQRRKEQRIDAILPLRTYEKSKYIDVDHIFSRTHHESTTV----CF---NL 462

  Fly   407 LQLFAICFLDYGLFWLLATI-----------SLHGHQETGLEVPAYVDLEIKGGGFVADVMRGIA 460
            || |.:..:..|||.|:..:           |...:|:.|   ...|...|.|.|.:|.::|...
  Fly   463 LQ-FLLELVTAGLFILIDHLVVELLQIVRKRSKIVYQQDG---EHEVRFNISGVGQMARLLRTTM 523

  Fly   461 NAFRPLTQK--SILDVNPCLP----LPVKPDYAEYLIILLLCLLAWLILLAEPYILRTRHLIMAH 519
            :.|. :.:|  :.|....|||    ||.|    .|..::||.|:..:::......||.|.:|.:.
  Fly   524 HNFN-IHEKVSTSLSNKECLPNAHVLPKK----MYYQLILLYLIIIVLIYQSTTFLRMRRVICSF 583

  Fly   520 FYPKRAKERGMFLYNMISEDRTSIFKFIRRRKRNEFNHTRNVKHTRNYTWLNNRFSCLMCM---- 580
            ||.||.|:|.:||||.|..:|....:|:.....:.....|..:....:.||  ||||.:..    
  Fly   584 FYYKREKQRILFLYNRILRNRLRSLEFLIHDAEDNLATHRIQQQVNVFLWL--RFSCPVAFGWIR 646

  Fly   581 --------CSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKCFEKSHNKCCLC 632
                    |..|...:.: ..|:||.         |..|     ||..|.|..::.|..|
  Fly   647 HFKFAKRTCMICRGLEDS-TFTVCGN---------CGLP-----YCDDCAEDLNSVCFQC 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6845NP_612000.3 DC_STAMP 344..533 CDD:462265 57/206 (28%)
snkyNP_648633.2 DC_STAMP 406..597 CDD:462265 57/206 (28%)

Return to query results.
Submit another query.