DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6845 and Ocstamp

DIOPT Version :10

Sequence 1:NP_612000.3 Gene:CG6845 / 38019 FlyBaseID:FBgn0035099 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_230857.6 Gene:Ocstamp / 311639 RGDID:1308620 Length:495 Species:Rattus norvegicus


Alignment Length:636 Identity:128/636 - (20%)
Similarity:199/636 - (31%) Gaps:264/636 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EESQPRYGAMWTFKLVAPYVIGGYLCGLAVTL--AWNWWQ----------LGHLVLGLNLTFAI- 53
            |..|..:|..|.|     :.:|  :|...|.|  |||.:.          |..|:|.::|...| 
  Rat     6 EAVQHLFGLGWKF-----WRLG--ICRAVVPLQAAWNAFSQPVPASRNELLTQLLLCVSLASLIA 63

  Fly    54 ----------------PVALVLA-----VFYS----RPVRCIVTLALPSLCSSRGRAFLI--SLA 91
                            |..||.|     ||.|    .|:||:..|::|:|.|.:||..|:  |.|
  Rat    64 GLVHHWLVSLQLYPLGPPTLVTALCGLFVFLSLGLVPPIRCLFALSVPTLGSEQGRRLLLSYSAA 128

  Fly    92 FVIAAVGPTANILANLKVMLRSLACGQELLRQALGQMLDVILEPVNAIQLAVDLLMREVRRVLKL 156
            .:.|||.|  |:|||::.:.|.|.|..|                                     
  Rat   129 NLAAAVMP--NVLANVRAVGRVLGCVTE------------------------------------- 154

  Fly   157 AMVVLLRIQDQLIAIIKTLKNCAAWLKSIVDLCNTEMGTPWARCKKTAHHAMIRCQSKMGVFKAL 221
                                      .|:..|.||..                            
  Rat   155 --------------------------GSLESLLNTTY---------------------------- 165

  Fly   222 CHAAKLFLALCYPAKIIDVFCSGYWDLSWGLLDKIAERYREFVRHIEEMFDANITFEHE-----F 281
                                             ::.:..||.| ...:....::|||.|     |
  Rat   166 ---------------------------------QLRQAARELV-PAGQAVSRSLTFEVEGNGSAF 196

  Fly   282 FFDTNSSKSLTDVGEEILQDIN------------KRLSSFIFLSSFVDILCWVMVVTVFFKATIF 334
            ...|::      |.::||:|.:            :|:.:.:||...:....|             
  Rat   197 RLHTHT------VTQQILEDFSGLEFLARAALGTQRVVTGLFLLGLLGESAW------------- 242

  Fly   335 YL-RYMHSRQFQNVFLTKILSDIDRRHEKHGYDPLL--PLHQLERAKYMKLTS-------LRLTL 389
            || ||:...:|.|::.|:   .:.|:..:.|...||  |...|.:....||:.       |||.|
  Rat   243 YLHRYLTDLRFDNIYATR---QLVRQLTQAGATHLLAAPPPWLLQTAQSKLSQEELLSCLLRLGL 304

  Fly   390 FEFVSIVENACFMATTCLQLFAICFLDYGLFWLLATISLHGHQETGLEVPAYVDLEIKGGGFVAD 454
            ...: ::..|..:|:           |||.| |||..::...|... .||..:.::......|.|
  Rat   305 LALL-LIATAVTVAS-----------DYGAF-LLARAAVTWAQNLP-SVPITLTVKYDASYKVLD 355

  Fly   455 VMRGIANAFRPLTQKSILDV-------------NPCLPLPVKPDYAEYLIILLLCLLAWLILLAE 506
            .:..:.|  :|..:.....|             |..||....|.....|....|.|||...|:.:
  Rat   356 FILFVLN--QPPVESVFASVQRSFQWELRFTSHNCHLPQAQPPRVTAALAAGALQLLAGATLVLQ 418

  Fly   507 PYILRTRHLIMAHFYPKRAKERGMFLYNMISEDRTSIFKFIRRRKRNEFNH 557
            .|..|.||.|.|.|:|.:...|...|...:            ||:.::.:|
  Rat   419 TYAWRLRHAIAASFFPAQEARRLSHLQARL------------RRRHDQSDH 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6845NP_612000.3 DC_STAMP 344..533 CDD:462265 51/210 (24%)
OcstampXP_230857.6 DC_STAMP 253..444 CDD:462265 51/209 (24%)

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